Thalassococcus sp. S3: CFI11_02095
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Entry
CFI11_02095 CDS
T05844
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
thaa
Thalassococcus sp. S3
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CFI11_02095 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thaa03019
]
CFI11_02095 (rnc)
03009 Ribosome biogenesis [BR:
thaa03009
]
CFI11_02095 (rnc)
03036 Chromosome and associated proteins [BR:
thaa03036
]
CFI11_02095 (rnc)
Enzymes [BR:
thaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CFI11_02095 (rnc)
Messenger RNA biogenesis [BR:
thaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CFI11_02095 (rnc)
Ribosome biogenesis [BR:
thaa03009
]
Eukaryotic type
90S particles
RNase
CFI11_02095 (rnc)
Prokaryotic type
rRNA processing factors
CFI11_02095 (rnc)
Chromosome and associated proteins [BR:
thaa03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CFI11_02095 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QBF30015
LinkDB
All DBs
Position
408283..408969
Genome browser
AA seq
228 aa
AA seq
DB search
MKLGADLRAFETRIGHRFSDPALVVRAVTHSSISSATRDDNQRLEFLGDRVLGLVMADAL
LRADPGASEGQLAPRFNALVRKETCAEIAREIDVGAVLKLGRSEMLSGGRRKQALLGDAL
EAVIAAVYRDAGYDAAEALILRLWGSRIDTVEVDARDPKTALQEWAQARGLTPPVYREVG
RSGPDHAPVFTIRAELDNGGVAEAQAGSKRQAEQTAAAQLLAEMEQQP
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctgggggcggatctgcgcgcgtttgaaacgcggatcgggcatcggttttctgac
cctgcgctcgttgtgcgcgcggtgacgcattcctcgatctcttcggcgacccgggacgac
aaccaaaggcttgaattcctgggcgaccgtgttctggggctggtgatggccgacgcgctt
ttgcgggcggatccgggggccagcgaggggcagttggcaccaaggttcaacgcccttgtc
cgcaaggagacctgcgcagagattgcacgcgaaatcgatgtgggcgcggtgctgaaactg
ggccggtccgagatgctgtcgggcgggcggcgcaagcaggcgcttctgggcgacgcactt
gaggcggtgatcgcggcggtctaccgcgatgcgggctatgatgcggcggaggccctgatc
ctgaggctctggggctcccggatcgataccgttgaggtcgacgcgagggatccaaagaca
gcgctgcaggaatgggcgcaagcgcgcggattgacaccgcccgtctatcgggaggtgggc
cggtccggacccgatcacgcgccggtcttcacgatccgggcagaactggacaatggcggc
gtggccgaggcgcaggcaggctcaaaacggcaggccgagcaaacggcggcggcgcagctt
ctggcggaaatggagcaacagccatga
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