Thalassococcus sp. S3: CFI11_02725
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Entry
CFI11_02725 CDS
T05844
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
thaa
Thalassococcus sp. S3
Pathway
thaa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFI11_02725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thaa03021
]
CFI11_02725
03400 DNA repair and recombination proteins [BR:
thaa03400
]
CFI11_02725
Enzymes [BR:
thaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFI11_02725
Transcription machinery [BR:
thaa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CFI11_02725
DNA repair and recombination proteins [BR:
thaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CFI11_02725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QBF30134
LinkDB
All DBs
Position
524149..525165
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLEVKPGNDPARQATVVAEPLERGFGLTLGNALRRILMSSLQGGAIT
SVQIDNVLHEFSSVAGVREDVTDIILNLKGVSLRMEVEGPKRLSINAKGPAVVTAGDISE
SAGIEILNREHVICHLDDGADLYMELTVNTGKGYVSADKNKPEDAPIGLIPIDAIYSPVK
KVSYDVQPTREGQVLDYDKLTMKVETDGSLTPDDAVAFAARILQDQLSIFVNFDEPESAS
RQDDDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEDWPPDNIEDLAKKFEDAF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccacaagaactgggccgagctgatcaaacccacacagctggaggtcaagcccgga
aacgatcccgcgcgtcaggcgacggttgtcgctgagccgctggagcgcggctttggtctc
acgcttggcaacgcgctgcgccggatcctgatgtcgagcctgcagggcggggccatcacg
tccgtgcagatcgacaatgtgctgcatgaattctcgtccgttgccggtgtccgtgaagac
gtcaccgacatcatcctgaacctcaagggcgtcagcctgcggatggaagtcgaaggcccc
aagcgcctgtcgatcaacgccaaaggccctgcggtcgtgaccgccggcgacatctcggaa
agcgcgggcatcgagatcctgaaccgtgaacatgtgatctgccacctcgacgatggggcc
gatctttacatggaactgacggtcaacaccggcaaaggctatgtctcggccgacaagaac
aagcccgaagacgcgcccatcggcctgatcccgatcgatgcgatctattcgccggtcaag
aaggtgtcctacgatgtgcagccgacccgcgagggccaggtgctcgactatgacaagctg
accatgaaggtggaaaccgacggctcgctcacgcccgatgacgcggtggcctttgccgcg
cgcatcctgcaggatcagctgtcgatcttcgtgaacttcgacgagccggaaagcgcttcg
cgtcaggacgatgatgacggtcttgaattcaacccgctcctgctcaagaaagtggacgag
ttggaattgtcggtccgctccgcgaactgcctgaagaacgacaacatcgtctatatcggc
gacctgatccagaaaaccgaagcggagatgctgcgcaccccgaacttcggtcggaagtcg
ctgaacgagatcaaggaagtgctgtctggcatgggtctgcacctcggcatggatgtcgag
gactggccgcccgacaacatcgaagatctggccaagaaattcgaagacgcgttctaa
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