Thalassococcus sp. S3: CFI11_03060
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Entry
CFI11_03060 CDS
T05844
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
thaa
Thalassococcus sp. S3
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thaa02000
]
CFI11_03060
Transporters [BR:
thaa02000
]
Other transporters
Pores ion channels [TC:
1
]
CFI11_03060
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
QBF30198
LinkDB
All DBs
Position
complement(584865..586760)
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AA seq
631 aa
AA seq
DB search
MKRTYCNLMATTAVLIANSALAQEEPVDLGTLILSGGLTPVEADAYGRSVSVLTSDDFET
RGIATIEDALRTLPGVSVTSTGSSLTQVRIRGSETNHVLVLVDGIEINSPSNGDYVFSGL
PLEDVESIEVLRGPQSAIYGSNASGGVISITTKKGTSGTTAQVSSEVGNFDSQAISASIQ
HRTERGGVSFSYSRHITDGEDLSRSGGDTEFNNRTVLNFGVDYALTETARVGLTYRRFEQ
DYGFDDTNDPDFGGTGTGRDDYIIDGNSTSQREETIVGLWSELSFFDSRLDTRLEATTGT
FDQTFLSSFGPYTTETERDGFKLRGSYALIGGSAAAADHKLNFVLERETETFTNSFAGGV
FEERSTNSVAAEYQGSFASGFDLQVGLRHDDHSRFDSTTSWNISGAYTLPGSDIRLRGSA
GTAVILPTMFEQFGQTPGGFIGNPNLQPEETRSLEVGADFGFANGRGDLGVTLFHQDIDN
LIQGNGSTAVNLAGTSSANGLELSAHYAATDWLDIGFGYAYINGESATGTKLVRRPEHEV
NLNLTAHYLNNRGTASVDLRHVDGNFITDQIANKVVEGDSFTTVNLALTYDINDRVELYG
RVNNLFDRDYQEVFGYNAPSRTAFVGVRAEW
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaacctattgcaacctgatggcgaccaccgcagtgctcatcgcgaactccgcg
ctggcacaggaggagcctgtcgatctcggcacgcttattctgtccggcggtctgacacct
gtcgaagcggacgcctatgggcgatctgtgtccgtcctcacttccgatgatttcgaaacc
cgcggcatagccacaatcgaagatgctctgcgcacattgcccggtgtttcagtgacctca
accggcagcagcctcacgcaagttcgaattcgcggcagcgagaccaaccacgttctggtt
ctcgtggacggtattgagatcaacagcccgtcgaacggggactatgtcttttcaggtctc
cctcttgaggatgtggagagcatcgaggtgctgcgcggtccacaatctgcgatctatggc
tcgaacgcttcgggcggggtcatctcgatcacaacaaagaagggaacaagcggcaccacg
gcccaggtttcgagcgaggtcggcaactttgacagtcaagcgatttcggcctccattcag
catcgtaccgaacgagggggtgtctccttctcctattcgcgccatatcaccgatggcgag
gatctgtcgcgttcaggcggggataccgagttcaacaatcgaacggttctcaatttcggt
gttgattacgcgctgaccgaaacagcgcgtgtcggtttgacatatcggaggttcgaacag
gactacggatttgacgacaccaacgatcccgattttggtggtacgggcacgggccgggac
gattacatcatcgatggtaattcgaccagccagcgtgaagagacgatcgttggcctttgg
tctgaattgagtttcttcgacagtcggctcgacacgaggctggaggcaacgacgggcacg
ttcgaccagacatttctgagttcatttggcccctatacaacagaaacagaacgagacggt
ttcaagctgaggggcagctatgccctgattggagggtctgcggcagcggccgatcataag
ctgaattttgtgcttgagcgtgaaacggagaccttcaccaacagcttcgccggcggcgtc
tttgaagagcgttcaacaaacagcgtggccgctgaatatcaggggtctttcgcaagtggc
ttcgatctgcaggttgggttgcgccacgacgaccacagccgctttgacagcacgacgtcc
tggaacatcagtggcgcatatacgctaccgggttcggatattcgtctgcgcggttctgcg
ggaacggcggtgattttgccgacgatgttcgaacagttcggtcagacgccgggcggcttt
atcggtaacccaaatcttcagcccgaagagacccggtctttggaggtcggggcggacttt
gggtttgccaacgggcgtggcgatctgggggtgacgctcttccatcaggacatcgacaac
ctgatccagggcaacggttcgaccgccgtcaatctggcagggacaagctcggccaacggt
ctggagctaagtgcgcattacgccgcaacagattggctcgatatcgggtttggatatgcc
tacatcaacggagagtcggcaaccgggaccaagctggtgcgtcgcccggagcatgaggtg
aacctcaatctgactgcacattacctgaacaatcgcgggactgcatccgttgacctacgt
cacgtggacggaaacttcatcaccgatcagattgccaataaagtggttgaaggggacagc
ttcacaacggttaatctggctctgacctacgacatcaacgaccgggtcgaactttacggt
cgcgtaaacaacctctttgatcgagactatcaagaggtttttggctacaacgcaccatcg
cgaacagcctttgtcggtgtgcgcgccgaatggtga
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