Thalassococcus sp. S3: CFI11_03370
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Entry
CFI11_03370 CDS
T05844
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
thaa
Thalassococcus sp. S3
Pathway
thaa00550
Peptidoglycan biosynthesis
thaa01100
Metabolic pathways
thaa01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CFI11_03370 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CFI11_03370 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
thaa01011
]
CFI11_03370 (mrdA)
Enzymes [BR:
thaa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CFI11_03370 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
thaa01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CFI11_03370 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
QBF30259
UniProt:
A0A4P6MF05
LinkDB
All DBs
Position
complement(643289..645229)
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AA seq
646 aa
AA seq
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MRRNPRELEKTHSVLTRRAVLLGGAKAAFIGALGLRMQYLQVDQADQFRLLAEENRINIR
LIPPARGDIFDRNGKIIAQNTPSYRIVVVREDAGDVDGVIARLSQLVELDDEDLNRAVTE
MRRSPPFLPVTVADQVSWRDVSTVAVNAPALPGVAPEVGLTRVYPRGQDFAHVIGYVGPV
SDYDLSQIEDPDQLLRIPRFQIGKVGLEAKKEDSLRGKAGTKRVEVNASGRVMRELDRRP
GQAGSDVQLTIDADLQNYVQSRLGNESASAVIMDCDSGDLLAIASSPSFDPNLFVRGISV
ADYRALTEDKYRPLANKTVQGTYPPGSTFKMITAMAALEDGLIGPDETVWCPGFLEVAGR
RFHCWKRAGHGHVDLQNSLKQSCDVYYYDLALKVGQDKISAMAQRFGLGIRHELPMSAIA
RGLAPDRAWKKRIHGEDWLIGDTANASIGQGFMLASPLQLAVMTARLATSRSVSPRLVKS
IDGVEEPSGAGEPLGMNENNLRKMRRAMYAVSNDRRGTAYSSRIIEDAFRMAGKTGTSQV
RNITAAERRAGVIRNEDLPWERRDHALFVNFAPYENPKYAVSVVVEHGGGGSKAAAPIAR
DITLQALYGGTPPLAAYPTKDRGRIQAQQERLQREQQARETARDRA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaaacccccgtgagctggagaaaacccattccgtcctgacccggcgcgccgtc
cttctgggcggggccaaggccgcgttcatcggggcgcttggtcttcgcatgcagtatctt
caggtagatcaggcagatcagttccgtcttctggccgaagaaaaccggatcaatatccgc
ctcataccgccggcgcgcggagacatctttgatcgcaacggcaagatcatcgcgcagaac
acgcccagctatcgcatcgtcgtggtccgcgaggatgccggggatgttgacggtgtgatc
gcgcgcctgtcgcaactcgtcgaacttgacgacgaagacctcaaccgcgcggtgaccgag
atgcggcgctcgccccctttccttcctgtcactgttgcagatcaggtgtcctggcgggat
gtgagcaccgttgcggtcaacgcccccgcgctgccgggtgttgcccccgaagtcggtctg
acccgcgtctacccccgcggccaggatttcgcgcatgtcatcggctatgtcgggccggtc
agcgactacgatctcagccagattgaagatcccgatcagcttttgcgcatcccgcggttc
cagatcggaaaggtggggctggaagccaagaaagaagacagtctgcgcgggaaggctggc
acgaagcgggttgaggtcaatgcgtcgggacgggtcatgcgggagcttgaccgccgcccg
ggtcaggctggctctgacgtgcagctgaccattgatgccgatcttcagaactacgtccaa
tcgcgcctgggcaatgagagtgcgagcgccgtgatcatggattgcgatagcggcgatctt
ctcgcgatcgcgtcatcacccagtttcgaccccaatctcttcgtgcgcggcatctcggtt
gcggattatcgggcgttgaccgaagacaagtaccgtcccctcgccaacaagaccgttcag
ggcacctacccgcccggctctaccttcaagatgatcacggcgatggccgcgttggaggat
gggctgatcggcccggatgaaaccgtatggtgcccgggattcctggaggtggccgggcgc
cgcttccattgctggaagcgtgcggggcatgggcatgtggacctgcagaactcgcttaag
caaagctgtgacgtttattactacgatctcgcgctgaaggtcgggcaagacaagatctcg
gccatggcgcaacggttcggcctgggcatccggcatgagctgccgatgtcggccattgcc
cgcggtcttgcaccggatcgggcgtggaagaaacggatccatggcgaggattggctgatc
ggggacaccgccaacgcgtctatcggacagggcttcatgctcgcctcccctcttcagctt
gcggtcatgacggcgaggctggcaacaagccggtctgtgtcgccccgcctcgtcaagtcc
atcgacggggttgaggagccatcaggtgccggcgaaccgcttggcatgaacgaaaacaac
ctgcgcaagatgcggcgcgcgatgtatgcggtgtctaacgaccgtcgtggcacggcctat
tcgagccgcattatcgaagacgcgttccggatggcaggcaagaccggaaccagccaggtg
cgcaacatcaccgccgccgaacgccgcgccggcgtgatccggaatgaagatctgccgtgg
gagcgccgggatcacgcgcttttcgtcaatttcgcgccttacgaaaatccgaaatacgcg
gtgtccgttgtcgtagaacatggcggcggcggttccaaggccgcggcacccatcgcgcgc
gacatcacgttgcaggccctttatggcgggaccccgccgctggccgcatatccgacaaag
gatcgtggccgcatccaggcgcaacaggagcggctgcagcgggaacagcaagcgcgcgag
accgccagggaccgcgcatga
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