Thalassococcus sp. S3: CFI11_03590
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Entry
CFI11_03590 CDS
T05844
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
thaa
Thalassococcus sp. S3
Pathway
thaa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFI11_03590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thaa03400
]
CFI11_03590
DNA repair and recombination proteins [BR:
thaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFI11_03590
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFI11_03590
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
DUF87
eIF3_p135
AAA
Kinesin
Motif
Other DBs
NCBI-ProteinID:
QBF30301
LinkDB
All DBs
Position
complement(682850..685030)
Genome browser
AA seq
726 aa
AA seq
DB search
MNTPVLHAAAPDVRSRPKLEGGIRLRMNTEFEPAGDQPTAIQELSAGVVAGDRDQVLLGA
TGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQPEA
YVPRSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYGAMTQD
LKAGKSYDQRQVMADLVAQQYRRNDQAFQRGSFRVRGDSLEIFPAHLEDRAWKLSFFGEE
LESITEFDPLTGEKTDTFDQIRVYANSHYVTPKPTMQQAILGIKKELRIRLDQLVGEGRL
LEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDHAIVFADES
HVSVPQIGGMYKGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAAWE
LEQAGGVFTEQVIRPTGLLDPEVEIRPVEMQVDDLLDEVRKVSEAGFRTLVTTLTKRMAE
DLTEYMHEQGIKVRYMHSDIDTIERIEILRDLRLGAFDVLVGINLLREGLDIPECGLVAI
LDADKEGFLRSETSLVQTIGRAARNAEGRVIMYADRITGSMERALAETNRRRAKQIAYNE
EHGITPETVKKNVEDVLAGLYQGDVDMNRVTATVDKGLAGGNLQAVLDGMRTDMRKAAEN
LEFEEAARLRDEIKRLEAVDLAVADDPMARQYAVEKASEEAVKTRGRSTAGRAGQRGGNV
KRRKRS
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacctgtcttgcatgctgccgcaccggacgttcggtcccgccccaagctggaa
ggcgggattcgtctgagaatgaatactgaattcgagcctgcgggcgatcagcccacggcg
atccaggagctgagcgccggcgtcgtggccggagaccgggatcaggtgctgctgggtgcg
acgggcaccggcaaaacctttaccatggccaaggtgatcgaggagacgcagcgcccggcc
atcatcctggcccccaacaagacgctggccgcgcagctttacggtgaattcaaagggttt
ttcccggacaacgcggtcgaatacttcgtgtcctactacgattattaccagccggaagcc
tacgtgccgcgatcggacacgtatattgagaaagagagccagatcaacgaacagatcgac
cgcatgcgccattcggcgacacgcgcgctgctggagcgggacgatgtgatcatcgtggcg
tcggtctcctgtatctacggtatcggatcggtggaaacctacggggcgatgacacaggat
ctgaaggccggaaagtcctatgatcagcgccaggtgatggccgatctggtggcccagcaa
taccgccgcaacgaccaggcttttcagcgcggatcgttccgggtcaggggagacagcctt
gagatcttcccggcgcatttggaagaccgggcctggaaattgagcttttttggcgaggaa
ttggaaagcattaccgaattcgacccgctgaccggggaaaagacggacacgttcgatcag
atccgcgtctatgccaattcgcattacgtgacgcccaagccgacgatgcagcaggccatt
ctgggtatcaagaaagagcttcgcatccggctggatcagcttgtcggcgaaggccggttg
ctggaggcccagcgcctggagcagcgcacgaatttcgatctggagatgctggaggcaacc
ggcgtctgcaacgggatcgagaattattcccgctatctgacgggccgcgcgcccggcgaa
ccgcccccgacgcttttcgagttcattcccgatcacgcgattgtctttgccgatgaaagc
catgtgtcggttccgcagatcggcggcatgtacaaaggcgactaccggcgcaaattcacg
ctggccgagcacggctttcgcctgccctcctgcatggataaccgccctctcaagttcgag
gaatgggacgccatgcgtccgcaatcggttttcgtttcggccaccccggccgcctgggaa
ttggaacaggcgggcggcgttttcacagagcaggtcatccgaccaacgggtcttttggat
ccggaggtcgagatccggccagtggaaatgcaggtggatgatctgctggacgaggttcgc
aaggtaagcgaagcaggctttcgaacgctggtgacgacgctgaccaagcgcatggccgaa
gatctgaccgaatacatgcacgagcagggcatcaaggtgcgctatatgcactccgatatc
gacacgatagagcggatcgagatcctgcgggacctgcgacttggcgcttttgacgttctg
gtcggcatcaaccttctgcgcgaaggcctcgacatccccgaatgcggtctggtcgcgatc
cttgacgcggacaaggaagggtttctgagatccgagacgtccctggttcagaccatcgga
cgcgcggcacggaacgccgaggggcgcgtgatcatgtatgcagatcgcatcaccgggtcg
atggagcgcgcgctggcggaaacgaaccgtcgccgggccaagcagatcgcctataacgaa
gagcatggcatcacgcccgaaacggtgaagaagaacgtcgaggacgttctggccggcctc
tatcagggcgacgtcgatatgaaccgggtcacggcgacggtcgacaagggtcttgcaggc
ggcaatctgcaggcggttctggacggcatgcgaaccgacatgcgcaaggcggcggagaac
ctggaattcgaggaagccgcacggctgcgcgacgagatcaagcggctggaggcggttgat
cttgccgtggcggacgatccgatggcccggcaatacgcggtcgagaaagcctcggaagag
gcagtgaagacccgcggtcggtcaacagcgggtcgcgccgggcaacgcggcggcaacgtc
aagcgccgcaagcgcagctga
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