KEGG   Thalassococcus sp. S3: CFI11_04245
Entry
CFI11_04245       CDS       T05844                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
thaa  Thalassococcus sp. S3
Pathway
thaa00300  Lysine biosynthesis
thaa00470  D-Amino acid metabolism
thaa01100  Metabolic pathways
thaa01110  Biosynthesis of secondary metabolites
thaa01120  Microbial metabolism in diverse environments
thaa01230  Biosynthesis of amino acids
Module
thaa_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:thaa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    CFI11_04245 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    CFI11_04245 (lysA)
Enzymes [BR:thaa01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     CFI11_04245 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N GH3_N_vert
Other DBs
NCBI-ProteinID: QBF30426
LinkDB
Position
807294..808559
AA seq 421 aa
MDHFLYRDGTLYAEDVPVADIAAAVGTPFYLYSTATLLRHYRLFEDALAGTEHLVCYAMK
AASNQAILKTLAEAGAGMDVVSVGEYLRARAAGVPGGRIVFSGVGKTADEIRTALEGGIR
QFNVESEPEMQVLSAVAESTGTSVPITIRVNPDVDAKTHAKISTGKSENKFGIPIARARD
VYALAASLPGLEVIGIDVHIGSQLTDLAPFELAFQKVAELTEVLRADGHDIRRLDLGGGL
GIPYTRSNEAPPLPLEFGALIKRTVGHLGCEIEIEPGRLIAGNAGIMVSRVIYVKSGEDR
DFLILDGAMNDLIRPAMYEAYHDIVPVIEPEPGAEQSPYDIVGPVCESGDTFAKGRLMPK
LSAGDLVAFRSAGAYGAVMSSEYNTRPLIPEVLVKDDQFAVIRARPTFDEIINRDTIPEW
L
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggatcactttctgtatcgcgacggcaccctttatgccgaagatgtcccggtggctgac
attgcagcggcggtcggcacgcccttttacctttattccaccgccacgctcctgcggcac
tatcgtctgttcgaggacgcgctggcggggacggagcatctggtctgctacgcgatgaag
gccgcaagcaaccaggccatcctcaagaccctggcagaggctggtgcgggtatggatgtg
gtttcggtcggagagtatctgcgcgcccgggccgctggcgttccgggggggcggatcgtt
ttttccggggtcggcaaaacagccgatgagatccgtaccgcgcttgaaggcgggatccgt
caattcaacgtcgaatccgaaccggaaatgcaggtgctaagcgccgtggccgagagcacg
gggacatcggttccaatcacgatccgggtgaacccagacgtcgacgccaagacacatgcc
aagatttccaccggcaagtccgaaaacaagtttggcatcccgattgcgcgggcccgcgat
gtctatgcgctggccgcgtccctgccggggttggaggtgatcgggatcgacgtccacatc
ggctcgcaactgacggatctggccccgtttgaattggcatttcagaaagttgcggagctg
acggaggtcttgcgggccgatggacatgatatccgccgtctcgatctggggggcggcctg
ggaattccctacacgcgctcgaacgaagcgccgccgctgcccttggagtttggcgcgctg
atcaagcggaccgtggggcatctgggctgcgagatcgagattgagcccggtcgactgatc
gcgggcaatgcaggcatcatggtcagccgggtcatttatgtgaaatccggcgaggatcgt
gatttcctgatccttgacggggccatgaacgacctgatccgacccgcgatgtacgaggcg
tatcacgacatcgttcccgtcatcgaacctgagcccggagcggaacaatccccctatgac
atcgtgggtccggtttgcgaatccggggacacctttgccaagggtcggctgatgccaaag
ctctccgccggggatctcgtggcctttcgcagcgcgggtgcctatggcgcggtgatgtcg
agtgagtacaacacacgccccctgatccccgaagttttggtgaaggacgatcaattcgcg
gttatccgcgcacgtccgacctttgacgaaatcataaatcgcgataccatccccgagtgg
ctataa

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