Thalassococcus sp. S3: CFI11_08190
Help
Entry
CFI11_08190 CDS
T05844
Name
(GenBank) RNA-binding protein
KO
K11089
60 kDa SS-A/Ro ribonucleoprotein
Organism
thaa
Thalassococcus sp. S3
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
vWA_Ro60
TROVE
VWA_CoxE
Motif
Other DBs
NCBI-ProteinID:
QBF31196
UniProt:
A0A4P6MF76
LinkDB
All DBs
Position
complement(1638117..1639673)
Genome browser
AA seq
518 aa
AA seq
DB search
MANKSVFASIKGRLLPKATARNAEAAPAYAYSDAHVLAQIAVTGTFGGMYYQCAQDELEY
VLEVAEAVDPRFLAQTAIYARQSGHMKDMPAVLLAILARRDPVLFRAVFGRVVDTGKMLR
TFVQVVRSGQTGRKSLGSAPKAMVQNWLNDASDRALIAANIGNDPSLADVIRMVHPKPAD
AAREALFAWIVGRPCDMALLPQALQDWIAFKETGKGPVPEVPFQMLTQLDLSAQHWSRIA
RKGSWQMVRQNLNTFLRHGVFGVTKNVDHVASLLRDPEAIARARVFPYQLMVATQNVAPE
MPDEIVEALHDAMEIAVQNVPRIGGQVVVCPDVSGSMMGSITGYRPGATSKVRHVDVAAL
VAAAFMRVNRGCQVLPFDFDVRNVRPRPRDTILTNAERLAELAGGGTNCSAPLRWLNRRG
RSPDLVVFVSDNQSWVDARKGGQGTAMMRQWEPIKRRNPKAKLVCIDIAPYGTTQAQTRE
DVLNIGGFSDAVFDQIAAFASGQTGPDHWVGEIEKIDI
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaaatccgtgtttgcatcgataaaaggccggttgctgccgaaagccaccgca
aggaacgccgaggcggcgccggcctacgcttactccgatgcccatgtcctggctcagatc
gctgtgaccggcacgttcgggggcatgtactatcagtgcgcccaggacgagcttgaatat
gttctggaagtcgccgaggccgtcgatccgcgctttctggcgcagaccgcgatctatgcg
cgccaatcgggccatatgaaggacatgccggcggttttgctggcgatcctggcccggcgt
gacccggtgctcttccgcgcggtctttggccgtgtggtcgacaccggaaagatgctgcgc
accttcgtgcaggtcgtccggtccggtcagacggggcgcaagtctctgggatctgcgccc
aaggcgatggtgcagaactggctgaacgacgcgtctgaccgggcgctgatcgcggccaat
atcggcaacgatccgtccctggcggacgtgatccggatggtgcaccccaagcccgccgat
gcggcgcgggaggcgctctttgcctggatcgtcgggcggccttgcgacatggccctgctg
ccgcaagcgttgcaggactggatcgcgttcaaggagaccggcaaaggcccggtgcccgag
gtgccgttccagatgctcacgcaactggatctgtcggcgcagcattggtcgcggatcgcc
cgcaagggctcgtggcagatggtgcggcagaacctcaacacgttcctgcgccacggcgtg
ttcggcgtgacgaagaacgtggatcacgtggccagcctgcttcgggaccccgaagccatc
gcacgagcccgcgtcttcccctaccagctgatggtagcgacgcagaacgtggcccccgag
atgccggacgagatcgtggaggcgctgcatgacgcgatggagatcgcggtgcagaacgtg
ccgcggatcggcggtcaggtcgtggtgtgcccggacgtgtcgggctccatgatggggtct
atcacgggctaccgcccgggtgccacctccaaggtgcgccatgtggatgtggcagcgctg
gtcgctgcggccttcatgcgggtcaaccgcgggtgccaggtcctgccgttcgacttcgac
gtgcgcaacgtgcgtccgaggccgcgcgacacgatcctgaccaatgcggagcgtctggcc
gaactggccgggggcggaacgaactgttccgcgccgctgaggtggctgaaccgtcgcggc
aggtcgccggatctggtggtcttcgtgtccgacaaccaatcttgggtggatgcccgcaaa
gggggacagggcacggcgatgatgcggcaatgggaaccgatcaagcgtcgcaacccaaag
gccaaactggtctgcatcgacatcgcgccctacgggaccacccaggcgcagacgcgcgag
gatgtgctgaatatcggcgggttctcggatgcggtctttgaccagatcgcggccttcgcc
tccggtcaaaccggcccggatcactgggtcggcgagatcgagaagatcgacatatga
DBGET
integrated database retrieval system