Thalassococcus sp. S3: CFI11_08205
Help
Entry
CFI11_08205 CDS
T05844
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
thaa
Thalassococcus sp. S3
Pathway
thaa03410
Base excision repair
thaa03430
Mismatch repair
thaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFI11_08205 (recJ)
03430 Mismatch repair
CFI11_08205 (recJ)
03440 Homologous recombination
CFI11_08205 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thaa03400
]
CFI11_08205 (recJ)
DNA repair and recombination proteins [BR:
thaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CFI11_08205 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CFI11_08205 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CFI11_08205 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
QBF31198
LinkDB
All DBs
Position
complement(1641746..1643485)
Genome browser
AA seq
579 aa
AA seq
DB search
MAFLGVETSLTGRRWIGPSLETSRAADAMAQQTDLPPAVCQVLARRGVPAVDAQRFLAPQ
LRDLLPDPRSLKDMSKAASRFLAAVNARHRIAIFADYDVDGGSSAALLIAWLRDMGQQAT
LYVPDRIDEGYGPNAPAMQALSRDHDLIICVDCGTLSHDALAAVQGADVIVLDHHLGGET
LPPAHAVVNPNRQDEDGALGYLCAAGVVFLMLVEAGRQMRDAGAKGPDLIALLDLVSLAT
VADVAPLVEANRALVRQGLKVMARRDRPGLVALADVARMDAAPTPYHLGFLLGPRVNAGG
RIGQADLGARLLATSDRHEAEALAERLDQLNTERREIEAAVRAAAITQAEARGADAPLVW
AAEDGWHPGVVGIVASRLKETLNRPAIVIGFDGDIGKGSGRSVSGVDLGASIQRLAAEGL
LLKGGGHKMAAGLTVTRDLLEPAMSRLSDLLARQGAGQAGPVDLKLDGTLMANAVSVPLL
EQIEAAGPFGAGAPAPRFALPSLDVRFAKPVGESHLKLSLSDGSGAGLDAICFGAFESDL
GTRLSARDGTRFHFAGRLEINSWAGRQTAQLRIEDAAPA
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
ttggcatttcttggagttgagacgtccctgacgggccggcgctggatcggcccctcactt
gagacatcgcgtgcggcggatgccatggcgcaacaaaccgatctgccgcccgcggtttgt
caggtgctggcccggcgcggcgttccggcggtcgatgcccagcggttccttgccccgcaa
ttgcgtgatctgctccctgatccgcgcagtctcaaggatatgtccaaggcggcctcccgg
ttcctggccgccgtgaacgcccggcaccgcatcgccatatttgccgactacgacgtcgat
ggcggcagctctgccgcgcttttgatcgcctggcttcgggacatgggccagcaggccacg
ctttacgtgcccgaccggatcgacgagggctatggcccgaacgccccggcaatgcaggcc
ctgtcccgcgaccatgatctgatcatctgcgtggattgcggaacgctctcgcatgacgct
ctggcggccgtgcaaggcgccgatgtcattgtcctcgaccatcacctgggcggtgagacg
ctgccgccggcccatgcagtggtgaatccgaaccgtcaggatgaagatggggcgctcggc
tatctctgtgccgccggtgtggtgtttctgatgctggtcgaagcgggccggcaaatgcgc
gacgccggtgcaaaggggcccgatctgatagccttgctggatcttgtttcactggcaacg
gtggccgatgtcgccccgctcgttgaggcgaaccgcgccttggtccggcagggtttaaag
gtcatggcccgacgcgatcgccccggtctcgtggcgcttgcggatgtggcgcgcatggac
gccgcacccacgccttaccacctgggcttcctgcttggcccgcgtgtgaatgccgggggc
cgcatcggtcaggcggatctgggcgcgcgccttctggccacgagcgatcgccatgaagcc
gaggccctggccgagcgtctggatcagttgaacaccgagcggcgcgagatcgaggcggcg
gtccgcgccgccgccatcacccaggccgaagcgcgcggcgccgacgccccgctggtctgg
gccgcagaagacggatggcaccccggtgtcgtcggcatcgtcgcctcgcgtctcaaggag
acgctgaaccgccccgcaatcgtaatcggctttgacggcgacatcggcaaggggtcgggc
cggtcggtctcgggcgtggatctgggcgcgtcgatccagcgcctcgccgccgaaggtctt
ttgctgaaaggcggaggccataagatggcggccggtctgaccgtgacccgggacttgctt
gagccggcgatgagccggctgtccgacctgctggcccggcaaggggccggtcaggcaggc
ccggtcgacctgaagctggacggcacgctgatggcgaacgcggtttccgtgccgctcctg
gagcagatcgaggccgcggggcctttcggtgccggcgcccctgccccgcgctttgccttg
ccgtctctggacgtgcgctttgccaagccggttggcgaaagtcatctcaaactctccctg
tccgatggctccggcgcaggtttggatgcgatttgcttcggcgcctttgaaagcgacctc
ggcacgcggctcagcgcgcgggacgggacgcgctttcatttcgcgggtcgtctggagatc
aacagctgggccggccgccagacggcacagctgcgcatcgaagatgccgcgccggcctga
DBGET
integrated database retrieval system
