Thalassococcus sp. S3: CFI11_08600
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Entry
CFI11_08600 CDS
T05844
Name
(GenBank) Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
thaa
Thalassococcus sp. S3
Pathway
thaa00970
Aminoacyl-tRNA biosynthesis
thaa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CFI11_08600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
thaa03029
]
CFI11_08600
Enzymes [BR:
thaa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
CFI11_08600
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
CFI11_08600
Mitochondrial biogenesis [BR:
thaa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
CFI11_08600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
DUF7384
Motif
Other DBs
NCBI-ProteinID:
QBF31275
LinkDB
All DBs
Position
complement(1728828..1730339)
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AA seq
503 aa
AA seq
DB search
MLDLTFEPPKVKTIAGAKQDWELVIGMEVHAQVSSNAKLFSGASTAFGAEPNSNVSFVDA
AMPGMLPVINEYCVEQAVRTGLGLKAEINLRSAFDRKNYFYPDLPQGYQISQLYHPIVGE
GEVIVEMGEGIARRVRIERIHLEQDAGKSIHDMDPAMSFVDLNRTGVALMEIVSRPDIRG
PEEAAAYIAKLRQILRYLGTCDGNMQNGNLRADVNVSICEPGAYERYQETQDFSHLGTRC
EIKNMNSMRFIQQAIDVEARRQIAIVEAGGKVEQETRLYDPDKGETRSMRSKEEAHDYRY
FPDPDLLPLEIEQAWVDDIETSLPELPDEKKARFINDFSLSDYDASVLTAEVESAAYFEA
VAEGRDGKLAANWVINELFGRLKKEDHDITESPISPTQLGQIIELIQKGDISGKIAKDVF
EIAYTSGREPSEIVETEGMKQVTDTGAIEAAVDQVIADNPAQVEKAKQNPKLAGWFVGQV
MKATGGKANPKAVNEIVSAKLGL
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgctggacctgacgttcgagcccccgaaggtgaaaacgattgccggagccaaacaggac
tgggaattggtcatcgggatggaggtgcacgcccaggtcagttccaacgccaagctcttt
tcgggcgcgtcgaccgcgttcggggcagagccgaattccaacgtctctttcgtggacgcc
gcgatgccgggcatgctgccggtcatcaacgaatattgtgtcgaacaggcggtgcgcacc
gggctgggtctgaaggccgagatcaacctgcgcagcgcgttcgaccgcaagaactatttc
tacccggatctgccgcagggctaccagatcagtcagctttaccaccccatcgtgggtgaa
ggcgaagtcatcgtcgagatgggcgaaggcatcgcccgccgcgtacggatcgagcgtatt
cacctggaacaggatgcgggcaagtcgatccacgacatggacccggcgatgtcctttgtg
gaccttaaccgcacgggcgtggcgctgatggagatcgtctcgaggccggacatccgcggc
cccgaagaggccgccgcgtatattgccaagctgcgccagatcctgcgctatttgggcacc
tgcgacggtaacatgcagaacggcaacctgcgcgcggacgtgaacgtgtcgatctgcgag
ccaggcgcctatgagcgctatcaggagacgcaggacttctcccatctggggacgcgctgc
gagatcaagaacatgaactccatgcggttcattcagcaggccatcgacgtcgaggcccgc
cgccagatcgccattgtcgaagccggcggcaaggtggagcaggaaacccggctctatgac
cctgacaagggcgagacccggtcgatgcggtccaaggaagaggcgcacgattaccgctat
ttccccgacccggatctgctgccgctggagatcgaacaggcctgggtggatgatatcgag
accagcctgccggaattgccggacgagaagaaagcgcgctttatcaatgatttcagcctc
tcggactatgatgcgtcggtgctgacggcagaggttgagtcagccgcttatttcgaggcc
gtggccgagggacgcgacggaaagctcgccgccaattgggtcatcaacgaacttttcggg
cggctgaaaaaggaagatcacgacatcaccgaaagccccatcagccccacgcaactgggc
cagatcatcgaattgatccagaagggcgatatcagcggcaagatcgcaaaggacgtcttt
gaaatcgcttatacgtcgggacgtgagccgtcagagatcgtcgaaaccgaaggcatgaag
caggtcaccgataccggcgcgatcgaggccgcggtggatcaggtgatcgccgacaacccc
gctcaggtggaaaaggccaagcaaaacccgaaactggcgggctggttcgtgggtcaggtc
atgaaggcaacgggcggcaaggccaacccgaaggccgtgaacgagatcgtgagcgcaaag
ctgggcctttga
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