Thalassococcus sp. S3: CFI11_08635
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Entry
CFI11_08635 CDS
T05844
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
thaa
Thalassococcus sp. S3
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thaa03400
]
CFI11_08635
Enzymes [BR:
thaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CFI11_08635
DNA repair and recombination proteins [BR:
thaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CFI11_08635
Prokaryotic type
CFI11_08635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QBF31282
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All DBs
Position
1737037..1738542
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AA seq
501 aa
AA seq
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MTVILWFKRDLRIYDHAALAHASGIGRVLPLYILEPKWWSQPDMSGRQFDFVREAVDDLG
DQLSTLGLDLCLRVGRAVDVLEEMRQRLGARHLVSHEETGNAWTFARDRAVADWAAGQGV
RWHELPQSGVVRRLEGRDGWAKQRNTYLRQPQIDPPAQIEGLVAPSDPWPDLGLHDPCPH
RQTGGRRAALSLLGGFLTERGRTYRSAMSSPLTGETACSRLSPHLAWGTISGREAAQAAG
ARQREVKGTREGWGGSLKSFQARLAWRDHFMQKLEDEPALEQRCLHMAYEGMRPMEPDRV
RLEAWQNGETGLPFVDACMRYLSATGWLNFRMRSMVTAVASYHLWLDWRVSGLHLARQFT
DFEPGIHWPQVQMQSGTTGMNTIRIYNPIKQGRDQDPDGVFTRRWVPELADVPDKYLQEP
WKWEHASQLRYPPPIVDVAAAAKAARDAVFAVRRGAQFRKEAERVIDKHASRKDPQGHFV
NDRAPRRRRAKPDDRQMGFEF
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcattctttggttcaagcgcgatcttcgtatctacgatcatgcggcactcgcc
catgcctcaggcattgggcgcgtgttgccgctttatattctggagccgaagtggtggtct
caacccgacatgtccggccggcaattcgacttcgttcgcgaggcggtcgatgatcttggc
gatcaactctccaccctcggcctggacctttgccttcgtgtcggcagggcggtggatgtt
ctggaggagatgcgccaacgattgggcgccagacatctcgtcagtcacgaggagaccggc
aatgcgtggaccttcgcccgggatcgcgcggttgcggactgggctgcggggcagggtgtc
cggtggcacgaactcccgcaatcgggcgttgttcgtcgtcttgaagggcgggatggctgg
gcaaagcagcgcaatacctacttgcgacagccgcagatcgatcctccggcacagattgag
ggtttggtcgccccctccgatccctggcccgatctgggattgcacgacccttgtccgcat
cgccagacagggggacggcgcgcggccttgtccctgctaggcggtttcctgacagagcgt
gggcggacctatcgcagcgcgatgtcgtcgcccctgacgggcgagacggcctgttcgcgc
ctgtctccgcatctcgcgtgggggaccatatcaggccgggaagcggcgcaggcggcaggc
gcacggcagcgggaggtgaaaggcacgcgcgagggctggggcggttcgctgaaatcgttt
caggcgcgcctcgcgtggcgcgaccatttcatgcaaaaactcgaggacgagccggccctt
gagcagcgttgtctgcacatggcctatgaggggatgaggccgatggagcctgatcgcgtg
cggctggaggcttggcagaacggtgaaaccggcctgcctttcgtggatgcctgcatgcgc
tatctttcggccacgggttggctgaacttccgtatgcgctctatggtgacggcggtcgcg
tcctatcatctctggctcgattggcgggtgagcggtctgcacctggcgcgtcagttcacc
gatttcgaacccggcatccactggccccaggtgcaaatgcagtccgggacgacggggatg
aataccatccgcatctacaatccgatcaaacaggggcgcgatcaggatcccgacggtgtg
ttcacgcgtcgttgggtgcccgaactggcggatgttcccgacaaatatcttcaggaacct
tggaaatgggaacatgcatcccaactccgatatccgccacccatcgtcgacgtggcagcg
gcggcaaaggccgcgcgcgatgccgttttcgccgtccgccggggcgcccagtttcgcaaa
gaggcagaacgcgtgatcgacaaacatgccagccggaaagacccgcaaggacatttcgtg
aatgatcgcgcgccccgacgacggcgcgccaagccggatgaccgccagatgggttttgag
ttctga
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