Thalassococcus sp. S3: CFI11_12400
Help
Entry
CFI11_12400 CDS
T05844
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
thaa
Thalassococcus sp. S3
Pathway
thaa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFI11_12400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thaa02000
]
CFI11_12400
Transporters [BR:
thaa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CFI11_12400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QBF32016
UniProt:
A0A4P6MHB8
LinkDB
All DBs
Position
complement(2493327..2494805)
Genome browser
AA seq
492 aa
AA seq
DB search
MNMTTSALALCAALALAPAVLAQETVTIGMQQEPTVLDPTVDATASIDGITAHNIYESLT
TVSESGEILPALAESWEVSEDGLTYTFNLVEGALFHDGSTFDADDVKFTFDRAMAEDSVN
PSKGIFEPIASVETPDAGTVVITLSQPDAFFLFNIAQGDASIVAPETAETNTTNPVGTGP
YRFDSWTRGDRLTLVANPEHRDYSDAVIDTVTIRFVADPAAAVAALMAEDIDAFPGMPAP
EVLEQFKADPRYDVVVGTTEGEVILALNNSRPPFDDIRVRRAVNHALDREAIIHGAYFGY
GEPIGSFFPPHHRSHVDLTDMYPHDPAAARALLEEAGAVGTEVTLRLPHFPYAKRSGEII
QAQLEATGFEVSIENVEWAFWIGEIYSKLNYDMTVIAHTSPNDLGNFARGPEYFYGYDNA
EFNALWEAIRTEPDPERLDALLKDGQRFVAEQAVHGFLFQLPKLGVYRTGLSGYWQSSPV
LFSPLNELRWES
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgacgacctccgccctggcgctgtgcgcggccctggccctggcccccgccgtg
ctggctcaagagactgtaacgatcggaatgcagcaggagccgacggtgctcgacccgacg
gtggatgccacggcctccatcgacgggatcaccgcgcataacatctacgaatcgctcacc
accgtgtccgaaagcggagagatcctgcccgcgctcgccgaaagctgggaagtgtccgag
gacgggctgacctacacattcaatctggtggagggcgcgctgttccacgatggcagcacc
tttgatgccgacgatgtgaaattcaccttcgaccgggccatggccgaggacagcgtgaac
ccgtccaagggtatcttcgagcccatcgcgtccgtcgagacgccggatgcgggcaccgtg
gtgatcacgctgtcgcagccggatgcgtttttccttttcaacatcgcgcagggcgatgcc
tccatcgtggcgccggagacggcggagaccaacacgaccaaccccgtgggcaccggcccc
taccggttcgacagctggacgcgcggcgaccggctgacgctggtggccaacccggagcac
cgcgattactctgacgcggtcatcgacaccgtcaccatccgcttcgtcgccgatcccgcc
gctgcggtggccgcgcttatggccgaagacatcgacgccttccccggcatgcccgcgccc
gaggtgctggagcagttcaaggccgacccacgctatgacgtggtcgtaggcaccacggaa
ggcgaggtgatcctcgcgctgaacaattcccgcccgccctttgacgacatccgcgtgcgg
cgggccgtgaaccacgcgcttgaccgcgaggcgatcattcacggcgcctattttggctat
ggggagcccatcgggtcgttcttcccgccccaccatcgttctcacgtggatctgacggac
atgtacccgcatgatcctgccgctgcccgcgcgctgctggaagaggcgggggccgtgggg
acggaagtcaccctgcgcctgccgcatttcccgtacgccaaacggtcgggggagatcatc
caagcccagcttgaggctacgggcttcgaggtgagcatcgagaatgtcgaatgggccttc
tggatcggagagatctattccaagctcaattacgacatgaccgtgatcgcccatacctcg
cccaacgacctgggcaatttcgcgcgcgggccggagtatttctacggctacgacaatgcc
gaattcaacgcgctgtgggaggcgatccggactgaacccgatccggagagactggatgcg
ctgctgaaagacggtcagcgtttcgtagccgagcaggcggtgcatggctttctcttccag
cttccgaaactaggtgtctaccggacgggtctgtcgggctattggcaatcctcgccggtc
ctcttctccccactgaatgagctacggtgggaaagttaa
DBGET
integrated database retrieval system
