Thalassococcus sp. S3: CFI11_12590
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Entry
CFI11_12590 CDS
T05844
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
thaa
Thalassococcus sp. S3
Pathway
thaa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFI11_12590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thaa02000
]
CFI11_12590
Transporters [BR:
thaa02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CFI11_12590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
QBF32053
LinkDB
All DBs
Position
complement(2532693..2533739)
Genome browser
AA seq
348 aa
AA seq
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MRLTRRSVVGGLAAATTLASPTILRAATRELVMTGYGNDSDAPLIAAGEELSRRNPGVSL
TIIGGLSAEALAQIKAARGNSPYDLGVMGSPAIVNAMAEEVLVPLDFSQIPNAANVIEKF
PGYGYDVGQPIWFEGIGVAYDTTRIDTPPTTWEELWSGDFNGRIGMCRPQSNLGLGVLAA
TAEAFGMPQDDMTFALEKWSELDPLIGRSPPLLQQMIERGEVDLAPLWHVNSALAASSGL
PIGYTKLTGPGPLMLPTNIVQFINTPDGTADLVHEFTDILLSPEIQSMANSAPIYFGTVV
EGVETPEEAAPYVPSTPEELATTTSLEWPSFAPLRGETVETFDRMFAA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagattgacacgaagaagcgtcgtgggggggcttgctgccgccaccacactcgccagc
cctaccatccttcgcgccgcgacgcgtgaattggtcatgaccggatatggcaacgattcc
gacgcgccgctgattgctgcgggcgaagagctttcgcgccgcaatcccggcgtctcgctc
acgatcatcggcggtctgtcagcagaggcgctggcgcagatcaaggctgcgcgcggcaat
tcgccttacgatctgggcgtgatgggctccccggcgattgtcaacgcgatggccgaggaa
gtgctcgtcccactcgacttctcgcagatcccgaatgcggccaacgtgatcgagaaattt
ccgggctatggatacgatgtgggccagccgatctggttcgagggcattggggtcgcctac
gacaccacccgcatcgacacaccacccacgacctgggaagagctttggtcaggcgacttc
aacggccggatcggcatgtgccgtccgcagtcgaacctgggcctgggcgtgttggctgcc
accgccgaagccttcggtatgccacaggacgacatgactttcgctttggagaaatggtca
gagctggaccctcttatcggccgctctccgccgctgctccagcagatgatcgagcgtggc
gaggtcgatctcgcaccactgtggcacgtgaactctgcccttgccgcctcgtccggtctg
ccgatcggctataccaagctgacgggacccggtccgctgatgctgccgacgaatatcgtg
cagtttatcaacacgcccgacggcaccgccgatttggtacacgagttcacagacatcctg
ctgtcgcccgaaatccagtccatggccaacagcgcgccgatctatttcggcaccgtggtc
gagggggtggagacaccggaggaggccgcgccctacgtgccatccacgccggaagaactg
gccacgaccacgtcgctcgaatggccgagttttgcacccttgcgtggcgagacggttgaa
accttcgaccggatgttcgcagcgtaa
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