Thalassococcus sp. S3: CFI11_12665
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Entry
CFI11_12665 CDS
T05844
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
thaa
Thalassococcus sp. S3
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thaa03400
]
CFI11_12665
Enzymes [BR:
thaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CFI11_12665
DNA repair and recombination proteins [BR:
thaa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CFI11_12665
Prokaryotic type
CFI11_12665
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QBF32067
UniProt:
A0A4P6MLM6
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All DBs
Position
complement(2548587..2550011)
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AA seq
474 aa
AA seq
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MGNSKTPVLVWVRRDLRTSDHPALSAACKSGRPVIPVFIRDSQVDGLGAAPKWRLGLGLE
AFAERLEEKGSRLVLRAGDALDVLQHVIEETGADAVYWSRLYDPDAVKRDSKVKAALKDK
GIEAKSFGGHLMFEPWTVETKTGTFYKVYTPFWKMVKDRDVDAPLPAPKDIPAPTMWPES
ENLDDWQLDAAMDRGAGVVRPHVRLGEAAAQARLGAFMAQIVDGYDASRDRPDQDGTSGL
SENMSLGEISPHTCWHAGMRAMHEGKKGAETFLKELVWREFAYHLMHHTPRILTGNWKED
WDAFPWNDDERKAEVKAWKQGRTGIQFVDAAMREMYVTGRMHNRGRMIVASYLTKHLLCH
WKIGLKWFEDCLIDWDPASNAMGWQWSAGSGPDATPYFRVFNPVTQLDKFDPNRDYVRHW
IAEGRSNPSDAALSYFDAIPRSWTMTPSDPYPKPIVAADEGRKKALAAYEARDF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggggaatagcaaaacaccggttctggtgtgggttcggcgggatctcaggacatcggat
catccggcactgagcgctgcctgcaagagcgggcggccggttatcccggtgttcatccgt
gacagccaggtggatggccttggcgccgcgccgaaatggcgactggggctgggtcttgag
gcctttgcagagcggctggaagagaaggggagccgtcttgtcctgcgcgcgggcgatgcg
ctggacgtattacagcacgtgatcgaagagactggcgcggacgcggtctattggtcgcgg
ctctatgatcccgacgcggttaagcgcgacagcaaggtcaaggcggcgctcaaggacaag
gggatcgaggccaagtcctttggcggccatctgatgttcgaaccctggacggtcgagacc
aagacaggcacgttctacaaggtctatacgccgttctggaagatggtgaaggatcgcgat
gtcgacgcacccttgcctgcgcccaaggacatcccggcgcccaccatgtggccggaaagc
gaaaatcttgatgactggcagctcgacgcggcgatggatcgcggggccggggtcgttagg
ccccatgtgaggcttggagaggccgcggcgcaagcccggttgggggccttcatggcgcag
atcgtggatggatacgacgccagccgggaccgtccggaccaggacggcacgtcggggctg
agcgagaacatgagcctgggtgagatcagcccgcatacctgctggcacgcgggaatgcgg
gcgatgcacgagggcaagaagggggcggaaacgttcctgaaagagctggtctggcgcgag
ttcgcctatcacctgatgcaccacacgccgcgcatcctcacgggcaactggaaagaggat
tgggatgccttcccgtggaacgatgacgagcgcaaggccgaggtcaaggcgtggaaacag
ggccgcaccggcatccagttcgtcgacgccgcgatgcgggagatgtatgtgacaggccgg
atgcacaatcgcgggcggatgatcgtggcgagctatctgacgaaacatctcctctgccac
tggaagatcgggctgaaatggttcgaggactgtctgatcgactgggatccggcctccaac
gcgatggggtggcaatggtcggcaggctcaggccctgatgccacgccttacttccgggtc
ttcaacccggtcacgcagctcgacaagttcgatccgaaccgggactatgtgcgccactgg
atcgctgaagggcggtcaaacccgtccgacgcggcgctgagctatttcgatgcgatcccg
cgctcgtggacgatgacgccaagcgatccatatccgaagcccatcgtggccgcggatgag
gggagaaagaaggcgcttgctgcttatgaagcgcgagatttctga
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