Thalassococcus sp. S3: CFI11_12875
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Entry
CFI11_12875 CDS
T05844
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
thaa
Thalassococcus sp. S3
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thaa03016
]
CFI11_12875 (rnd)
Enzymes [BR:
thaa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CFI11_12875 (rnd)
Transfer RNA biogenesis [BR:
thaa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CFI11_12875 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QBF32108
UniProt:
A0A4P6MFU9
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Position
complement(2586860..2588017)
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AA seq
385 aa
AA seq
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MKTLTTTQELAAFCKTAAAHPYVTVDTEFLRERTYFSKLCLIQLAVPGDGEDSAVLVDPL
MDGMALDPLYDLFRNEDVVKVFHAARQDLEIFYIDAGVFPRPLFDTQVAAMVCGFGEQVG
YETLVRKIVRQPLDKTSRFTDWSRRPLTEAQKTYALADVTHLRKIYEYLAAELQKSGRAR
WVAEELEILLTPATYDIKPQDAWRRIKTRSNSPRFLAVVRELAAFREAYAQKNDVPRNRV
FKDDALVELASTKPKNHADLGQSRLLLREARKGEIAEGILEAVARGVSCAPENLPALDRS
RDKMQVNPALADLLRVLLKAKTEASGVAAKLIAPSADLDAIAAGLRDVPALSGWRREVFG
ADALRLCEGRIALAATGQAVAIVEI
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgctcacaacgacgcaagaattagcggccttttgcaaaacagcggctgctcac
ccctatgtcaccgtcgatacagagttcctgcgtgagcgaacctatttctcaaagctctgc
ctgatccaattggctgtgcccggtgacggcgaagacagcgccgttctggtggatccgttg
atggacgggatggcgcttgatccgctctatgatctctttcgcaacgaagacgtggtgaag
gtctttcacgccgcgcgacaggatcttgagattttctatatcgacgccggtgtctttccg
cgcccccttttcgacacgcaagtcgccgcgatggtctgcggctttggcgagcaggtgggc
tatgaaacgctggtgcgcaagatcgtgcgccagcccttggacaagacctcacgctttacg
gactggtcccggcggcccctgacagaggcgcagaagacatatgccctggccgatgtgacg
catctgcgcaagatctacgaatatctggcggcagagctgcaaaagagcgggcgtgcgcga
tgggttgccgaagagctggagatcctcctgacgccggcgacctatgatatcaaaccgcag
gacgcctggcgccggatcaagacccgcagcaattccccccgctttctggccgtggtgcgc
gagttggcagcgtttcgggaggcttacgcccagaagaacgacgtgccccgcaaccgggtt
ttcaaggatgatgcgctggttgagcttgcctcgaccaaacccaaaaatcacgccgatctt
ggccagtcccgtctgctgctgcgcgaagcccggaagggagagatcgccgaagggatcctg
gaggccgttgcgcgcggagtgtcctgcgcgccggaaaaccttccggcgctggatcgcagc
cgggacaagatgcaggtcaatccggctttggccgatctgctgcgtgttcttttgaaagcc
aaaacggaggcatcgggcgtggccgcgaagctgatcgcgccaagcgcggatctggacgcc
atcgctgcgggcctgcgcgacgtgcccgctctgtcgggctggcggcgcgaggttttcggg
gccgatgcgctgcggctttgcgaagggcgcatcgctcttgcggccacgggccaggccgtg
gccattgtcgagatctag
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