Thalassococcus sp. S3: CFI11_20220
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Entry
CFI11_20220 CDS
T05844
Name
(GenBank) AsnC family transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
thaa
Thalassococcus sp. S3
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thaa03000
]
CFI11_20220
03036 Chromosome and associated proteins [BR:
thaa03036
]
CFI11_20220
Transcription factors [BR:
thaa03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
CFI11_20220
Chromosome and associated proteins [BR:
thaa03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CFI11_20220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_IclR
MarR
HTH_20
MarR_2
HTH_Crp_2
HTH_11
HTH_5
Fe_dep_repress
HTH_28
TrmB
DUF7343
NirdL-like_HTH
LexA_DNA_bind
AsnC_trans_reg_3
CtsR
HTH_1
HTH_39
Sigma70_r4_2
HTH_35
LytTR
Xre-like-HTH
Rrf2
Myb_DNA-binding_7
DUF6159
HTH_23
HTH_34
Motif
Other DBs
NCBI-ProteinID:
QBF33518
UniProt:
A0A4P6MJC8
LinkDB
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Position
complement(4103417..4103875)
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AA seq
152 aa
AA seq
DB search
MILDTIDRRILSALQRRGRMSNAELSEQVNLSPSACHRRVQRLESEGFIRDYVALLDPRK
LGVPTTVFVEITLQGQADEVLDAFEKAVARIPDVLECHLMAGSADYILKVVAENTEDFAR
IHRQYLARLPGVAQMQSSFALRTVFKTTALPV
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgatccttgatacgattgaccggcgcatcctgtcggctttgcaacggcgcgggcggatg
tccaacgcggaactctccgaacaggtcaacctgtctccatcggcctgtcatagacgtgtg
cagcggcttgagagcgagggatttatccgcgactacgttgcgctgctggacccacgcaag
ctgggggttccaacgacggtcttcgtcgagatcacgttgcagggccaagctgacgaggtt
ctggacgcttttgagaaggcggtggcccgcatcccggatgtgctggaatgccatctgatg
gcgggaagtgcggattacattcttaaggtcgttgccgaaaacaccgaggattttgctcgg
atccatcgccaatatctcgcccgattgcccggtgtcgcccagatgcaaagctcattcgcg
ctgcgaacggtgttcaaaacgacagctctgccggtttga
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