Thalassococcus sp. S3: CFI11_20245
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Entry
CFI11_20245 CDS
T05844
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
thaa
Thalassococcus sp. S3
Pathway
thaa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CFI11_20245
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
thaa01007
]
CFI11_20245
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thaa03016
]
CFI11_20245
Enzymes [BR:
thaa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
CFI11_20245
Amino acid related enzymes [BR:
thaa01007
]
Aminoacyl-tRNA synthetase
Class II (U)
CFI11_20245
Transfer RNA biogenesis [BR:
thaa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CFI11_20245
Prokaryotic type
CFI11_20245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
HSP33
Motif
Other DBs
NCBI-ProteinID:
QBF33523
UniProt:
A0A4P6MKW6
LinkDB
All DBs
Position
complement(4107051..4109450)
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AA seq
799 aa
AA seq
DB search
MKFTLSWLKTHLDTDASVDEIAETLTDLGLEVEEISNPAARLRDFTIGKVLEAEKHPDAD
RLRVCQVDTDEGVKQIICGAPNARAGITVVVAKPGVYVPGIDTTISVGKIRGIESFGMMA
SEREMELSDEHDGIIELPSGEVGESFADWLAANRPAKVDPVIEIAITPNRPDALGVHGIA
RDLAARGLGTLKTTDIAPVPGVFPCPVSVSIDADTQDQCPVFYGRLIRGVKNGPSPAWLQ
DALRAIGLRPISFLVDVTNFYTYDRNRPLHVFDADKIAGNALRVHRAQGGETLVGLDEKE
YAFEPDMTLISDAEGVESIAGVMGGLPTGVTEQTENVFLEAAYFDPIRTAYTGRALKINS
DARYRFERGIDPLWTPVGIEAATRMILDHAGGEASEVVVTGKLPETARAYRLDAARVQSL
VGMEIPEADQRQTLTALGFKLEGDMAHVPSWRPDIQGEADLVEEVARIASLTKLEGKPLP
RVTAGVPQPVMTLKQRREQAARRTCAALGYNECISYSFIDQASAALFGGGEDATRLENPI
SSEMSHMRPALLPGLLQAASRNQARGINDMALFEVGPAFDGGEPGEQHLLITGLLVGHTG
PKDVLGASRPVDVFDAKADAEAVLAAIGAPTKVQILRGAPDWWHPGRHGKICLGPKKVLG
LFGELHPRILEKMDVKGPAMAFTIRPDEVPQPRKAAATRPALELADLQPVERDFAFVVDA
DVEALTLVNAAAGADKALIADVHVFDEFIGGSVGDGKKSLAVTVRLQPKEATLKEAEIEA
VSAKIVDKVTKATGGVLRG
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcacgctttcctggctgaagacgcatctcgacaccgacgcctccgtggacgag
atcgccgaaacgctcaccgatctggggctcgaggtcgaggagatctcgaacccggccgcg
cgccttcgcgactttaccatcggcaaggtgctggaagccgaaaagcaccccgatgccgat
cgtctgcgcgtttgtcaggtcgacaccgacgagggtgtgaaacagatcatctgtggggcg
cccaatgcccgtgcgggtatcaccgtcgtggtggccaagcccggcgtctacgtgcccggc
atcgacaccaccatcagtgtgggcaagatccggggtatcgaaagcttcggcatgatggcg
tccgagcgggagatggagctcagcgacgagcatgacggcatcatcgaattgccatcggga
gaggtcggcgagagctttgccgattggctcgcggccaatcggcctgccaaggtcgatccc
gtgatcgagatcgcgatcaccccgaaccgtcccgacgcgctgggcgtccatggcattgcg
cgcgatctggccgcgcgagggctcggcacgctgaagacaacggatattgcgccggtgcct
ggtgttttcccgtgccccgtcagcgtcagcatcgatgcggatacgcaggatcaatgcccg
gtcttttacggtcggcttatccgcggcgtgaaaaacggccccagccccgcctggctgcaa
gacgccctgcgcgccatcgggttgcgcccgatctcctttctggtggacgtcaccaacttc
tacacatacgaccgcaaccgccctctgcatgtcttcgacgccgataaaatcgcgggcaat
gcgctgcgtgtccaccgggcccagggcggcgaaacgcttgttgggctggatgagaaggaa
tacgcgttcgagcccgacatgacgctgatctcagacgccgaaggggtcgagagcattgca
ggcgtgatgggtggtctgccgaccggcgtgaccgagcagacggagaatgtctttcttgaa
gcggcctatttcgatccgatccgcacggcctataccggtcgcgccctcaagatcaattcc
gatgcccgctaccgctttgaacgtgggatcgatccgctctggacaccggtcgggatcgag
gcggccacccggatgatccttgatcacgccgggggtgaagcgtccgaggtcgtggttacg
ggcaaactgcccgagacggcgcgcgcatatcgcctcgatgccgcgcgggtgcaaagcctc
gttggcatggagatccccgaagcggatcagcgccagaccctgaccgctcttgggttcaag
cttgaaggggacatggcgcatgttccgtcttggcggccggatatacagggcgaggccgat
ctggtcgaggaagtcgcccgcatcgcatcgctgaccaagcttgagggaaagccgctgcca
cgggtcaccgctggcgtgccgcagcccgtgatgacgctgaaacagcggcgcgaacaggcc
gcgcggcgcacctgcgcggcactcggctataacgaatgcatcagctattccttcatcgat
caggcatccgccgccttgtttggtggcggtgaagatgcaacgcggctcgaaaacccgatc
tcctccgagatgagccatatgcgccccgcgcttctgccgggcctgcttcaggcagcgtca
cggaaccaagcgcgtggcatcaacgatatggccctttttgaagtcgggcccgccttcgac
gggggtgagccgggcgagcagcacctgctgatcaccggcctgttggttggtcacacggga
cccaaggatgttcttggtgcaagccggcctgtcgatgtgttcgacgccaaggcggatgcc
gaagccgtcctggccgcaatcggtgcgccgaccaaggtgcagatcttgcgaggcgccccg
gattggtggcacccggggcggcacggcaagatctgtctcggacccaagaaggtgctgggc
cttttcggcgaactgcatccccgcatcttggaaaagatggatgtgaagggtcctgcgatg
gcattcacgatccggccggacgaggtcccgcagccccgtaaggcagccgcgacccgcccg
gcgcttgaacttgcggatctgcaaccggtggagcgtgactttgcctttgtggtcgatgct
gacgtggaagccctgacattggtcaacgccgcggcgggggcggacaaggcgttgatcgct
gacgtccatgtctttgacgaattcatcggcggatcagtgggggacggcaaaaagtccctt
gccgtcaccgtacgcctgcagccgaaagaggccacgttgaaagaggccgagatcgaagcc
gtcagcgccaagatcgtcgacaaggtgaccaaggcaacgggcggagttctacgcggataa
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