Thalassococcus sp. S3: CFI11_21025
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Entry
CFI11_21025 CDS
T05844
Name
(GenBank) diguanylate cyclase
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
thaa
Thalassococcus sp. S3
Pathway
thaa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFI11_21025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thaa02000
]
CFI11_21025
Transporters [BR:
thaa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CFI11_21025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QBF33678
UniProt:
A0A4P6MJR8
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All DBs
Position
4257625..4259289
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AA seq
554 aa
AA seq
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MTFYTRTGKELPRAVLESAAKVGDDAVNRREFLALASAFGATTATAYAMLGMASPARAAG
HAKGGTVRIQMEVRAVKDPRTNDWSQIANFTRGWLEYLVAYENDGTFTPHLLESWEINDD
ATEYTLNVRKGVKWNNGDDFTAEHVAMNITGWCEKDVEGNSMAGRFATLIDPNTNKAIEG
AIEVVDSHTVKLKLPKPDISLIPGMADYPAAIVHPSYTVDTMLSNPVGTGPYLPENLEVG
VKSSLVLNPDHTWWGSEVLGGPFLDRIEYIDYGTDPSAWVAAAEADEIDMMYSIDGDFID
IMGAQDGWSQHEIVTAATIVIRPNQLADVDGKKPYEDIRVRKALQMAVDNEVLLELGYGG
RGLAAENHHVGPMHPEYAELPPIKADPEGAMKLLEEAGMADFEHELLSIDDAWRKDTTDA
VAAQLRDAGIKVKRTVLPGSTFWNDWAKYPFSSTNWNHRPLGVQIWALAYRSGEAWNEFG
YSNPDFDALLEKTLATADVEARRAMMADGQKMIQDDGVTIQPYWRSLYNHTKENLVGGEH
HISFEIRPAQIAWT
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgacattttacacgcgaaccggcaaagagttgccccgggcggttctggagtcagcggcg
aaagtcggtgatgatgccgtgaaccgccgggagtttctcgcgcttgccagtgcattcgga
gcgacgacggcgacggcctatgcaatgcttggaatggcgtctccggcccgtgctgcgggc
catgccaaaggcggcacagtgcgcatccagatggaggtccgcgccgtcaaggacccgcgc
accaacgactggtcccagatcgccaatttcacccggggctggctggaatatctcgtcgcc
tatgaaaacgacggcaccttcaccccgcacctgctggaaagctgggaaatcaatgacgac
gcgaccgaatacactctgaatgtccgtaagggtgtgaaatggaacaatggcgatgacttc
accgccgaacatgtcgccatgaacatcaccggctggtgcgaaaaggacgtcgaaggcaac
tcgatggcgggtcgcttcgccacactgatcgaccccaacaccaacaaggccatcgagggc
gcgatcgaggtggtggacagtcacaccgtcaagctgaagctgcccaaacccgacatctcg
ctgatcccgggcatggctgactatccggctgcgatcgtgcatccgtcctatacggtcgac
acgatgctttcgaacccggtgggcaccggaccctatctgccggaaaaccttgaagtgggc
gtgaaatcttcgctcgttctgaaccccgatcacacttggtggggctccgaggttctgggc
ggccccttccttgatcggatcgaatacatcgactacggaaccgacccgtcggcctgggtg
gccgcggcggaggccgacgagatcgacatgatgtattccatcgacggcgacttcatcgac
atcatgggcgcccaggacggctggtctcagcatgagatcgtcaccgcggcgaccatcgtg
atccggccaaaccagcttgccgatgtagatggtaagaagccttacgaggatattcgtgtg
cgtaaggccctgcagatggccgtcgacaacgaggtgctgcttgagcttggttatggcggg
cgcggactggccgctgaaaaccaccatgtcggcccgatgcatccggaatacgcggaactg
ccgccgatcaaggccgatcccgagggtgccatgaaactgcttgaagaggccggaatggcg
gatttcgagcacgagctgctgtccatcgacgatgcgtggcgcaaggacaccaccgatgct
gtggccgcgcagctgcgtgatgcggggatcaaggtgaagcggacggttctgcccggctct
accttctggaacgactgggcgaaatacccgttcagctccaccaactggaaccaccgtccg
cttggcgtgcagatctgggcgcttgcctatcgctctggcgaggcctggaacgagttcggc
tattccaaccccgacttcgacgctttgcttgaaaagacgctcgcaactgcggatgtggaa
gcacggcgcgcgatgatggccgatggccagaaaatgattcaggacgacggcgtgacaatc
cagccctactggcgctcactttataaccacaccaaagaaaatctggtgggcggtgagcat
catatctcgttcgagatccgaccggcccagattgcctggacctga
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