Thalassococcus sp. S3: CFI11_21460
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Entry
CFI11_21460 CDS
T05844
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
thaa
Thalassococcus sp. S3
Pathway
thaa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFI11_21460 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thaa03019
]
CFI11_21460 (pnp)
03016 Transfer RNA biogenesis [BR:
thaa03016
]
CFI11_21460 (pnp)
Enzymes [BR:
thaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CFI11_21460 (pnp)
Messenger RNA biogenesis [BR:
thaa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CFI11_21460 (pnp)
Transfer RNA biogenesis [BR:
thaa03016
]
Prokaryotic type
tRNA degradation factors
CFI11_21460 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QBF33758
UniProt:
A0A4P6MJY2
LinkDB
All DBs
Position
4346323..4348467
Genome browser
AA seq
714 aa
AA seq
DB search
MFNVTTKSMQWGEETLTLETGKVARQADGSVIATLGETSVMANVTFAKAPKPGQDFFPLT
VHYQEKYYAAGKIPGGFFKREARPTEKETLTARLIDRPIRPLFVSGFKNEVLVMCTVLSH
DLVNDPDIVAMIAASAALTISGAPFMGPIAGARVGFEDGEYVLNPTVDDMQDLRLNPEQR
LDLVVAGTKDAVMMVESEAYELTEAEMLGAVTFAHEQIQPVIDLIIALAEEAAKEPFDYQ
PADISELYAAVKAAGEDKLRAAYEIMDKQDRTTAQNAAREHILESLTEEQREDINVVQAI
KKLEASILRGDVVKTGKRIDGRKTDEVRSIVCETGMLPRTHGSALFTRGETQGLVVTTLG
TGDDEQFIDALHGNFKSNFLLHYNFPPYSVGEAGRVGPPGRREIGHGKLAWRALQAVLPA
STDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKSAVAGVAMGLILEEDGSYA
ILTDILGDEDHLGDMDFKVAGTENGITSLQMDIKVAGITPEIMEKALAQAKDGRMHILGE
MNKALTGAAEFSVHAPRIETMQVPTDKIREVIGSGGKVIREIVEVSGAKVDINDDGIIKI
ASPNGEAIKKAYDMIYSIVAEPEEGAIYTGKVVKIVDFGAFVNFFGKRDGLVHVSQIENR
RLNHPSDVLKEGQDVKVKLLGFDDRGKVRLSMKVVDQETGEEITKEKKEEAAED
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgtaacgacgaaatcgatgcagtggggggaagagaccctcacattggaaacg
ggcaaggtcgcccgtcaggcggacggatccgtcatcgccacgcttggcgaaacctcggtc
atggccaacgtgaccttcgcgaaggcgcccaaacccggtcaggacttctttccgctgacc
gtccactatcaggaaaaatactatgccgcgggcaagatccccggcggctttttcaagcgt
gaggcgcgccccacggagaaagaaaccctcaccgcgcgcctgatcgaccgtccgatccgt
ccgcttttcgtatcgggcttcaagaacgaagtgttggtcatgtgtaccgtgctctcgcac
gatctggtcaatgaccccgatatcgtggcgatgatcgcagcctccgccgcgctgaccatt
tccggcgcgcccttcatgggcccgatcgcaggcgcgcgggtgggctttgaggatggtgaa
tatgtcctcaacccgaccgtggacgacatgcaggacctgcgcctgaatcccgaacaacgc
ctcgacctggtcgtggccgggaccaaggacgcggtcatgatggtcgaatccgaagcctac
gagctgaccgaggctgagatgctgggcgccgtgaccttcgcgcatgagcagatccaaccg
gtgatcgacctgatcatcgcgctggccgaagaagccgccaaagagcccttcgactatcag
cctgccgatatctcggagctttacgcggccgtgaaagcagcaggcgaggacaagctgcgc
gccgcttacgagatcatggacaagcaggaccgcacgacggcgcagaacgccgcgcgtgaa
catatcctggaaagcctgacggaagagcagcgcgaagacatcaatgtcgttcaagccatc
aaaaagctcgaagcctcgatcctgcgcggcgacgtggtgaaaaccggcaagcggattgac
ggacgcaagaccgacgaggttcgctctatcgtctgcgaaaccggcatgctgcctcggacc
cacggctcggccctcttcacccgcggtgagacgcaaggtttggtggtcaccacgctgggc
accggcgatgatgagcaattcatcgacgccctgcacggcaacttcaaatcgaacttcctg
ctgcactacaacttcccgccctactcggtcggcgaagcgggccgcgtgggccctccgggc
cggcgtgagatcggtcacggcaaactggcatggcgcgcgctgcaagccgtgctgcccgcc
tcgaccgacttcccctacacaatccgcgtggtgtcggaaatcaccgaatccaacggctcg
tcctcgatggcgtcggtctgcggcgggtcgctgtccatgatggatgcgggcgtgccgctg
aaatcggctgtggccggtgtggccatgggtctgatcctggaagaggacggatcctacgcg
atcctcaccgacatcttgggtgacgaagaccacctgggcgacatggacttcaaagtggca
ggtaccgaaaacggcatcacctcgctgcagatggacattaaggttgcgggcatcaccccc
gagatcatggagaaagccctggcgcaagccaaggacggccggatgcatatcctgggtgag
atgaacaaggccctgaccggtgccgcggaattctccgtccacgcgccccgaatcgaaacg
atgcaggtgcccaccgacaagatccgcgaagtgatcggatcgggcggcaaagtcatccgc
gagatcgtggaagtgtcgggcgccaaggtcgacatcaacgacgacggcatcatcaagatc
gcaagcccgaacggcgaagcgatcaaaaaggcctacgacatgatctattcgatcgtggcc
gagcccgaagagggcgcgatctataccggcaaggtcgtcaagattgtggatttcggcgcc
ttcgtgaatttcttcggcaagcgtgacgggctggtccacgtctcccagatcgaaaaccgt
cgcctgaaccatccgtccgatgtgctgaaggaaggtcaggacgtgaaagtcaagctcctg
ggcttcgacgatcgcggcaaggtgcgcctgtcgatgaaagtcgtcgatcaggaaaccggt
gaagagatcaccaaggaaaagaaagaggaagcggcagaggactga
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