Thalassococcus sp. S3: CFI11_23415
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Entry
CFI11_23415 CDS
T05844
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
thaa
Thalassococcus sp. S3
Pathway
thaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CFI11_23415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thaa03400
]
CFI11_23415
DNA repair and recombination proteins [BR:
thaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
CFI11_23415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
EcoEI_R_C
DGCcoil
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QBF34135
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Position
4782813..4785428
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AA seq
871 aa
AA seq
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MMAQYLEIKEAHADALLFYRMGDFYEMFFDDAVAAAEALDIALTKRGKHNDADIPMCGVP
IHAAEGYLLTLIRKGFRVAVCEQMESPAEAKKRGYKAVVKRDVVRLVTPGTLTEDALLEA
RRHNFLTSYAQVRDAVALAWADISTGAFHVMPVTPSRISPELARLAPSELIVSEQAERDL
AEVTSDLGIAMTPIARSSFDSTAAEARLCEVFSVSTLEAFGYFKRAEIAAMGALVTYLEI
TQKGKIPLLQPPVREAEDRVVQIDAATRRNLELTHALSGGRAGSLLSVIDRTVTPGGARL
LEQRLSSPSRQLDVIHDRLAAVEFAAEQVQICEDLRAALRKAPDLDRALSRLALDRGGPR
DLAAIRNALTQAGVIRERLNAVALPPLIDRAAADLTGHDDLIDLLDQALIADPPLLARDG
GFIAQGYDEELDEARQLRDEGRSVIAGLQQQYADHTEIASLKIKHNNVLGYFIETTATHA
DKMMSQPLSGTYIHRQTTANQVRFTTVELSEMETKILNAGNRALEIEKRLYERLKGAILN
VSADVASTARALAELDLTCALADLARAEDWTKPQIDQSRAFAVDGGRHPVVEHALRTAGG
APFIANDCDLTAEDGAAIWLLTGPNMAGKSTFLRQNALIAILAQIGSYVPATRAHIGVIS
QLFSRVGASDDLARGRSTFMVEMVETAAILNQADDRALVILDEIGRGTATYDGLSIAWAT
LEHLQASNRSRALFATHYHELTALAGKLEGVDNATVAVKEWDGEVIFLHEVRKGAADRSY
GVQVAQLAGLPASVVDRARVVLEALEKGDREGGTKPKALVDDLPLFSAVAAPAPAVAKPS
PLQDMMDAVHPDELTPREALELIYRLKEAAK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgcaatatctcgagatcaaggaggcgcatgccgatgcgcttctgttctatcgc
atgggcgatttctacgagatgttctttgacgatgccgtcgccgcggcggaggcgctggat
attgcgctgacaaaacggggcaagcacaacgacgcggatattccgatgtgcggcgtgccg
attcacgccgccgaagggtatctgctgaccctgatccgcaaaggctttcgcgtggccgtg
tgcgagcagatggaaagcccggccgaggcgaaaaagcggggctacaaggccgtggtcaag
cgggatgtcgtgcggctggtcacgcccggaacgctgaccgaagacgccctgctagaggcg
cggcggcataatttcctgacgtcctatgcgcaggtccgggacgcggttgccctggcttgg
gccgatatctccaccggggcgtttcacgtgatgccggtcacaccgtcgcgcatcagtccc
gagcttgcgcggctggctccgtcggaactgatcgtgtcggaacaggcagagcgggatctg
gcagaggttacctccgacctcggtatcgccatgacgcccatcgcgcgctccagctttgac
agcaccgcggcagaagcacggctgtgcgaagtcttttccgtctctacactcgaggcgttc
gggtacttcaaacgggccgagatcgcggcgatgggggcattggtcacctatctggagatc
acgcagaagggcaagatacccctccttcagcccccggtgcgagaggcagaggaccgcgtc
gttcaaatcgacgccgcaacccgccgaaatctcgagcttacccatgccctgtccggcggt
cgtgccggttctcttttgtcggtcatcgaccggaccgtcacgcccggcggcgcgcggctg
ttggagcagcgtctttccagcccctcacgccaattggacgtcatccacgatcggctcgcc
gctgttgaattcgccgctgagcaggttcagatctgtgaagaccttcgcgccgccttgcgc
aaggcgcctgatctcgaccgtgccctctcccgccttgcgctggatcggggcggcccgcgc
gacttggcggccatccgcaacgcgctcacgcaagcgggcgtgatccgggagaggttgaac
gcggtcgccctccccccgctcatcgaccgcgccgccgctgatctcacgggtcacgatgac
ctgatcgatcttctggatcaggcgctgatcgctgaccccccgcttctggcccgcgacgga
ggtttcatcgcccaaggctatgatgaagagcttgatgaagcgcgccagcttcgcgacgag
gggcgctctgtcatcgccggtcttcaacagcaatacgccgatcacaccgagatcgcatcg
ctcaagattaagcataacaacgtattgggctacttcatcgaaaccacggcaacccatgcg
gacaagatgatgtcccaaccgctgtcgggtacctatatccatcgtcagaccaccgccaac
caggttcgctttaccacggtggaactgtcagagatggagaccaagatcctcaatgccggc
aaccgggctttggagattgaaaagcggctctatgaaaggctgaagggggcgatcctgaac
gtgtccgctgacgtcgccagcacggcgcgcgccctcgctgaacttgatctgacctgtgcg
ctggcggacctggcacgggccgaagactggaccaaaccccagatcgaccaaagccgcgcc
tttgcagtggacggtggccggcatccggtcgtggaacatgcgcttcgcaccgcgggaggt
gcgcctttcatcgccaatgactgcgatctaaccgccgaggatggggccgccatctggctt
ctgaccggtccgaatatggccggtaaatccactttccttcggcagaacgcccttatcgcg
atccttgcgcagattggcagctatgtaccagcgacccgcgcccatatcggcgtgatcagc
cagctttttagccgtgttggcgcctccgacgatctggcacggggccggtctaccttcatg
gtcgagatggttgaaacagcggcaattcttaaccaggctgacgaccgcgcgcttgtgatc
cttgacgagatcgggcgtggcacggcgacctatgacggtctttccattgcctgggccacg
ctggagcatttgcaggccagcaacagatcacgcgcccttttcgccacccattatcatgag
cttacggccttggccggcaagcttgagggcgtggacaacgcgacagtcgcggtcaaggaa
tgggacggcgaggtgatctttctgcacgaagtgcgcaaaggcgcggcggatcgttcctat
ggggttcaggtggcacagcttgccggtctgcccgcctctgtcgttgaccgggcgcgcgtc
gtcctcgaagcgcttgaaaaaggggatcgcgaaggtggcaccaagccaaaagcgctcgtc
gatgatctgccgctgttctcagcagtcgcggcaccagcgcccgccgtcgccaagccgtcg
ccgttgcaggacatgatggacgccgtccaccccgatgagctgacgccgcgcgaggcgctg
gagttgatctataggcttaaggaagccgcgaaatag
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