Thalassococcus sp. S3: CFI11_24030
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Entry
CFI11_24030 CDS
T05844
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
thaa
Thalassococcus sp. S3
Pathway
thaa00521
Streptomycin biosynthesis
thaa00523
Polyketide sugar unit biosynthesis
thaa00525
Acarbose and validamycin biosynthesis
thaa00541
Biosynthesis of various nucleotide sugars
thaa01055
Biosynthesis of vancomycin group antibiotics
thaa01100
Metabolic pathways
thaa01110
Biosynthesis of secondary metabolites
thaa01250
Biosynthesis of nucleotide sugars
Module
thaa_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
thaa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CFI11_24030 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CFI11_24030 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CFI11_24030 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CFI11_24030 (rfbB)
00525 Acarbose and validamycin biosynthesis
CFI11_24030 (rfbB)
Enzymes [BR:
thaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CFI11_24030 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
adh_short_C2
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
QBF34258
UniProt:
A0A4P6MLA4
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Position
pS3B:28070..29119
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AA seq
349 aa
AA seq
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MKLLVTGGAGFIGSAVVRQAIAAGHDVINLDALTYAACLENVAGVADHPRYHFERADIRD
RAALDRILAQHRPDAVMHLAAESHVDRSIDGPGTFIETNVLGTFHLLEAARAYWTGQGRP
GAFRFHHISTDEVFGSLGPDPKTDGQFTESTPYDPRSPYSASKAGSDHLVRAWHETYGLP
VVLTNCSNNYGPYHFPEKLIPVVILNAISGQPIPVYGVGENVRDWLYVEDHADALLTVIG
RGQVGRSYNIGGENEVRNIDLVRMICAILDRVRPQDRPYADQIAFVTDRPGHDLRYAIEP
TRIREELGWRPSVTLQDGLERTVTWYLANEDWWQPLLNRQGVGQRLGTG
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctggtgaccggaggggcggggttcatcggatcggccgtggtccgccaggcc
attgccgcgggccatgacgtgatcaacctcgatgcgctgacctatgcggcctgtctggaa
aacgtggccggcgtggcggatcatccgcgatatcatttcgaaagggccgatatccgggac
cgggccgctctggaccggatcctggcgcagcaccggcccgatgcggtgatgcatctggcg
gcggaatcccatgtggaccgctccatagacgggcccggcaccttcatcgaaaccaacgtg
ctgggcaccttccatctgctcgaagccgcgcgggcctattggacggggcagggccggccc
ggggcgttccgcttccatcacatctccaccgacgaggtcttcggctccctgggccccgat
cccaagacggacgggcaattcaccgagagcacgccatatgatccacgctctccctattcg
gcatcgaaggccgggtcggatcatctggtgcgggcctggcacgaaacctacggcctgccc
gtcgtgctgaccaattgctcgaacaattacggcccctatcactttcctgaaaagctgatc
cccgtggtgatcctgaatgcgatttccggtcagccgatcccggtctatggcgtgggagag
aatgtgcgcgactggctttatgtcgaagatcacgccgacgcgctgctgaccgtgatcggc
cgggggcaggtggggcgcagctacaatatcggcggtgaaaacgaggtgcgcaatatcgac
ctggtgcggatgatctgcgcgatcctcgaccgggtgcgcccgcaagaccggccctatgcc
gaccagatcgcattcgtcaccgaccgccccggccacgatctgcgatacgcgattgagccc
acccgcatccgggaggagctgggctggcggccttcggtcaccctgcaggacgggcttgag
cggaccgtgacctggtatctggccaacgaggattggtggcagccgcttctgaaccggcag
ggcgtgggccagcgtctgggcacgggctga
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