Thalassotalea sp. LPB0316: LP316_00300
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Entry
LP316_00300 CDS
T08426
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
thab
Thalassotalea sp. LPB0316
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thab03016
]
LP316_00300 (truD)
Enzymes [BR:
thab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LP316_00300 (truD)
Transfer RNA biogenesis [BR:
thab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LP316_00300 (truD)
Prokaryotic type
LP316_00300 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QOL25802
UniProt:
A0A7L9S6U3
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All DBs
Position
complement(65603..66637)
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AA seq
344 aa
AA seq
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MSQLKPVPYLYGEPQVTGKLRSQMSDFKVFEILPFEPCGEGEHLIIHVRKTGANTVYVAR
ELAKYFKVSEKLVTYAGLKDRFAVCEQSFGVHLPGKQSYDLSDLEIEGVEVLSWQRHNKK
LKTGALIGNRFEITLADVSDMAAVEQRWQQICQTGVPNYFGEQRFGIDGGNIERAHSLFA
GNKVKDKKKRSIYLSTARSLIFNEIIAKRINTNTYHQLQAGDVCMLAGTQSVFLADSIDQ
TLENRLLEKDIDITASMWGAGELMTTGDVAALEQSVADEHTDFAKGLAKFGLKQERRRIR
LNITQPKISINGQAVTVSFFLPSGCFATTVLRELIKYQDMTVRV
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagccagctaaaacctgtgccgtatctttacggtgagccacaagtcacaggtaaactg
cgcagtcagatgagcgacttcaaagtgtttgaaattttgccatttgagccttgtggtgaa
ggtgaacatttaattattcacgtgcgtaaaactggcgccaataccgtttatgtggccaga
gagttggcaaaatattttaaagtgtcggaaaaattagtgacttacgctggtttaaaagac
cgattcgcggtttgtgagcagtcgtttggcgtccatttaccgggcaaacagagctatgat
ttgtctgatctcgagattgaaggcgttgaggtcttaagttggcaacgccacaataaaaag
ctcaaaaccggcgcgctcatcggcaatcgctttgaaatcaccttagctgatgttagcgat
atggcagctgttgaacaacgctggcaacaaatctgtcaaacgggcgtgccgaactacttt
ggtgagcagcgctttggtatagatggtggcaatattgagcgagcacacagtttatttgct
ggcaataaagtgaaagacaaaaagaagcgcagtatttatttatctaccgcgcgttcactt
atcttcaacgaaattatcgctaaacggattaatactaatacctaccaccaattacaagct
ggtgatgtttgtatgttagcgggtacgcaatccgtctttttagccgactcgattgatcaa
acactcgaaaatcgcctactagaaaaagacattgatattacggcgtcaatgtggggcgct
ggcgagttgatgacaactggcgatgtcgcggcacttgagcagtcagttgcagatgagcat
actgattttgccaaaggcttagctaagtttggcttaaaacaagaacgacgccgtattcgt
cttaatatcacccaaccaaaaatttcaatcaatggccaagccgtgacagtgagtttcttt
ttgccatcaggttgttttgctaccacggtattaagagagctaatcaagtatcaagatatg
acggtgagggtatag
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