Thalassotalea sp. LPB0316: LP316_02790
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Entry
LP316_02790 CDS
T08426
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
thab
Thalassotalea sp. LPB0316
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thab03009
]
LP316_02790 (dbpA)
Enzymes [BR:
thab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LP316_02790 (dbpA)
Ribosome biogenesis [BR:
thab03009
]
Prokaryotic type
rRNA helicases
LP316_02790 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_30
AAA_19
AAA_22
DUF1529
Tc-R-P
CbiA
Motif
Other DBs
NCBI-ProteinID:
QOL26247
UniProt:
A0A7L9S7F2
LinkDB
All DBs
Position
complement(623695..625083)
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AA seq
462 aa
AA seq
DB search
MHSTDFSTLNLKPALFDNLASLGYHQMTPIQAQTLPLIVAGKDVIGQGKTGSGKTAAFAL
GLLQALNVKKFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSL
EHGAHIIVGTPGRIEDHLFRGRLNLENVNTLVLDEADRMLEMGFQAALDNIVEQCPNDRQ
TLLFSATFPEKIQQISAKFMHQPELIKVASVHQESAISQAFYHLENSAERIDATKRLLLD
KQPSSAVIFANTKAEVNDIYQALQHDGFSVLALHGDMEQRERNETLLRFANQSALILVAT
DVAARGLDIDDLEMVINYHLTRDTEVHVHRIGRTGRAGAQGIACSLYTDKDTRKIADLEE
YFDMVVEPLPLPTPDVLAIAPPKAKMVTIQIDGGKKHKLRPGDIVGGLTGKQGIKGDQIG
KIQVTDLKAYVAVQSNVAKVALKKIERDKMKGKTFRARLMTW
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
gtgcattcaacagacttttctaccctaaatttaaagccggcgttattcgataatttagcg
agcttgggttatcaccaaatgaccccaattcaggcgcaaaccttgccgttaattgttgct
gggaaagacgtgatcggtcagggaaaaactggctcgggcaaaaccgcagcttttgcgtta
gggttgttgcaagcacttaacgtgaaaaagtttcgcgtccaatcgttagtgctttgccct
acgcgtgagttagccgatcaagtggccaaagaaattagaacgcttgcccgaggtattcac
aacattaaggtacttacgttgtgtggcggtatgccgatggggccacaaattggttcatta
gagcacggcgcacatattattgttggcacaccagggcggattgaagatcacttatttcgc
ggccgtttaaatcttgaaaacgtcaacacactggtattagacgaagccgatcgcatgctt
gaaatgggttttcaggcggcattagataatattgttgaacagtgtccaaacgatcggcaa
actttgttgtttagtgctacgtttccagaaaaaattcagcaaatatcagcgaaatttatg
catcagcctgagctgattaaagtggcgagtgttcatcaagaaagtgccattagccaagcg
ttttatcacctagaaaatagtgccgagcgcatcgatgctaccaagcgattattactcgat
aaacagccgagctcagcggttatttttgccaataccaaagcggaagtaaacgatatttat
caagcactacaacacgatggctttagcgtgctcgcactacacggtgatatggagcaacgc
gaacgcaatgaaactttgttaagatttgctaaccaaagtgcattaattttagtagcaact
gatgttgctgctcgcggcttagatattgatgatttagaaatggtgattaactatcactta
acccgtgacacagaagtacacgtgcatcgcattggtcgtactggtcgcgctggcgctcaa
ggtattgcttgttcactttataccgataaagacactcgtaaaatcgctgatcttgaagaa
tattttgatatggtggttgagcctttaccgctacctacacctgatgtattagctattgcg
ccgccaaaagcaaaaatggtgacgattcaaatcgacggtggtaaaaagcacaaacttcgc
cccggtgatattgttggtggtttaaccggtaaacaagggataaagggcgatcaaattggc
aaaattcaagtaaccgatctaaaagcctatgttgcggtacagtcgaatgttgcgaaagtg
gcgttaaagaaaatagagcgcgataaaatgaaaggcaaaacctttcgcgcccgtttaatg
acgtggtag
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