Thalassotalea sp. LPB0316: LP316_02960
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Entry
LP316_02960 CDS
T08426
Name
(GenBank) mechanosensitive ion channel
KO
K16053
miniconductance mechanosensitive channel
Organism
thab
Thalassotalea sp. LPB0316
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thab02000
]
LP316_02960
Transporters [BR:
thab02000
]
Other transporters
Pores ion channels [TC:
1
]
LP316_02960
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GFIT
Motif
Pfam:
MS_channel_2nd
MSSS
RGP
Motif
Other DBs
NCBI-ProteinID:
QOL26280
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Position
662418..663656
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AA seq
412 aa
AA seq
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METWLNFLSSNGASPEMVGWVEHLSGLLVVLTLAIIARYVAKYPIKSVIKQAVSKSRNTY
DDLLDQEKVLDRLTAIVPSVVIILSAPLVLQQEHSITHIVVTFAKCMISFQVAKTISALL
NVINRTYESVAQERYIPLNPIIQVLKLTLYLIALILAVSFVVDRSPLYLLSGLGAIAAAL
MLVFQDTIKGFAASMQISANKMVTIGDWVELPKYGADGDVLEIGLTTVKIQNFDKTIVTV
PTYALTSDSFKNWHGMKISGGRRIKRTIAIDTNSIRFYQADDLEQLKHLTLLKPYIEEKL
AHINAESAEKNLAENDINARQLTNIGTFRAYITLYLKQHDQVNHSMTCMVRQLPAEAKGI
PLELYFFSKDKRWISYEGIQSDIFDHLYAIAPIFDLRIFQLPSGYDWQQARR
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggagacatggttaaactttttgtcgtcaaatggcgcaagccccgaaatggtaggctgg
gttgaacatctgtcaggcctacttgttgttctaaccttggctattattgctcgctatgtg
gcgaagtatccaattaagtctgttattaaacaggcggttagcaaatctcgcaacacctat
gacgatttacttgaccaagaaaaggttttagataggcttaccgctatcgtccctagtgtt
gtgattattttgagcgcgccgctagtcttacagcaagagcattcgatcacacacattgtt
gtgacatttgctaaatgtatgatcagttttcaggttgctaaaaccataagcgccctgtta
aatgtgattaatcgaacctatgaatcagttgcccaagagcgttatattccgctcaaccct
atcattcaagtgctcaaacttaccttatatttaatcgcacttattttagctgtctctttt
gttgttgaccgctcgccactgtacttactcagtggcttaggggcaatagcagccgcttta
atgttagtgtttcaagatacaataaaggggtttgctgccagtatgcaaatctcggctaat
aaaatggtcaccattggtgattgggtcgagctgccaaaatatggcgctgatggtgatgtt
ctcgagatcggcttaaccacagttaaaatacaaaactttgataaaaccattgttactgtg
ccgacttatgcgctcacttcagactcgtttaagaactggcacggcatgaaaatttcaggt
ggtcgaagaatcaaacgtacgattgccatcgacaccaatagcattcgcttttatcaagca
gacgatctagagcagttaaaacacttaaccttgttaaagccatatatcgaagaaaagctt
gctcacatcaacgcagaaagtgccgaaaaaaatctcgcagaaaacgatatcaatgcacga
caactcaccaatataggtacttttcgcgcctatattacgctgtatttaaaacagcacgac
caagttaatcactcgatgacctgcatggtgaggcaattacccgctgaagcgaaaggtatt
ccactagagctatattttttcagtaaagacaagcgctggattagttatgaaggcattcaa
tctgatatttttgatcacttatacgccatcgccccaatttttgatttgcgtattttccaa
ttgcccagtggctatgattggcagcaggctaggcgctaa
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