Thalassotalea sp. LPB0316: LP316_03600
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Entry
LP316_03600 CDS
T08426
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
thab
Thalassotalea sp. LPB0316
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thab03009
]
LP316_03600 (rsmB)
Enzymes [BR:
thab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LP316_03600 (rsmB)
Ribosome biogenesis [BR:
thab03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LP316_03600 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_31
Methyltransf_25
FtsJ
MTS
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
QOL26404
LinkDB
All DBs
Position
complement(803158..804441)
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AA seq
427 aa
AA seq
DB search
MSKNVRALAAKCVFNVVDKGRSLSEELPLAQAQAADKDSALLQEICYGVVRYLPELEYSV
RDLVDKPLKGKQRVAHFLLLVGIYQLKYMRIPDHAALNETVSAAKPLKQFHLKGMINAVL
RNFLRQNESSLENLPEPVKYNHPSWFINKLKAAYPEKWQTILQANQAKPPMWLRVNEQHH
SVTDYSKLLTQEGIEHTVEQTLAPTILLKSAVDVSKLPGFEQGHVSVQDGAAQQAGWLLE
AKAGDSVLDCCSAPGGKTCHVLELTPDCLMTAIDIEDKRLARVQENLTRLNLNAKLVSAD
ATTSDWWNGERFDRILLDAPCSATGVIRRHPDIKWLRKADDIDALAKVQQEILQNIWQML
KPGGTLLYATCSVLPEENKAQIAHFLANTPEASLVPITDNPDDIGWQILPDEQAMDGFYY
AKLIKNN
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaatgtacgcgcactcgctgctaaatgcgtatttaacgtggttgataaaggt
cgtagcctgtcagaagagttgccactagcgcaagcacaggcagcagataaagattcagcc
ctattacaggaaatttgttacggcgttgttcgttacttaccagaacttgaatacagcgtc
cgcgatctggtggataaaccattaaaaggtaaacagcgcgttgctcattttctgttactc
gtgggaatttatcaattaaagtacatgcgcattcccgatcacgcagcacttaacgaaacg
gtttcagcagctaaaccacttaagcaatttcatttaaaagggatgattaacgcggttttg
cgcaactttttaaggcaaaacgagagctcgttagaaaacttacctgagccagtaaaatac
aatcacccaagttggtttatcaacaaacttaaagcggcctacccagaaaaatggcagacc
attttacaagcaaaccaagctaaaccaccaatgtggttgcgggttaacgagcaacatcac
agtgttaccgattacagcaagttattaactcaagaaggtattgaacacacggttgagcaa
acacttgcaccgacaatattattgaaaagtgcagttgatgtcagcaaattgcccggcttt
gagcaaggccatgtctctgtgcaagacggtgcggctcagcaagctggttggttacttgaa
gcaaaagctggtgatagtgttttggattgttgctcggcccccggtggtaaaacttgtcat
gtattagaactgacgcctgattgcctgatgacggctatcgatattgaagataaacgctta
gctcgtgtccaagaaaacttaactcggctaaatcttaacgctaagcttgtcagcgccgat
gcaactacaagtgattggtggaacggtgagcgctttgatcgaattttattagacgcgccg
tgttcggcaaccggggtcattaggcgtcatcctgatatcaaatggttgagaaaagccgac
gatatcgatgcattagctaaagtacagcaagaaattttgcaaaatatatggcagatgcta
aaaccaggtggtaccttgctatatgctacctgtagcgtattaccagaagaaaacaaagcg
caaatagcgcactttttagcaaatacgccagaggcaagcctagtaccaataacagataac
cctgacgatattggctggcaaatactccctgacgaacaggcgatggacggcttttattac
gccaaactgatcaaaaataactaa
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