Thalassotalea sp. LPB0316: LP316_04990
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Entry
LP316_04990 CDS
T08426
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
thab
Thalassotalea sp. LPB0316
Pathway
thab00071
Fatty acid degradation
thab00280
Valine, leucine and isoleucine degradation
thab00310
Lysine degradation
thab00362
Benzoate degradation
thab00380
Tryptophan metabolism
thab00410
beta-Alanine metabolism
thab00640
Propanoate metabolism
thab00650
Butanoate metabolism
thab00907
Pinene, camphor and geraniol degradation
thab00930
Caprolactam degradation
thab01100
Metabolic pathways
thab01110
Biosynthesis of secondary metabolites
thab01120
Microbial metabolism in diverse environments
thab01200
Carbon metabolism
thab01212
Fatty acid metabolism
Module
thab_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LP316_04990 (fadB)
00650 Butanoate metabolism
LP316_04990 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LP316_04990 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LP316_04990 (fadB)
00310 Lysine degradation
LP316_04990 (fadB)
00380 Tryptophan metabolism
LP316_04990 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LP316_04990 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LP316_04990 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LP316_04990 (fadB)
00930 Caprolactam degradation
LP316_04990 (fadB)
Enzymes [BR:
thab01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LP316_04990 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LP316_04990 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LP316_04990 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LP316_04990 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
ZirS_C
Motif
Other DBs
NCBI-ProteinID:
QOL26659
UniProt:
A0A7L9S9L1
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All DBs
Position
1124966..1127128
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AA seq
720 aa
AA seq
DB search
MLFQGKSLTAELLADGIVEMQFNAEGSVNKFDQATFEEFVKVIDAIKNCNEAKGVLVTSG
KSTFIVGADITEFLETFKRPEEELVPWVKNASDIFDAFEDLELPTIAAVNGFALGGGCEM
ILSCDFRIADTTASIGLPEVKLGLMPGFGGTVRLPRLIGADNAVEWMSTGKPHKPEQALK
VGVLDSVVAPEMLKEGAISILKQAIDGKLDWRAKRQPKLEALKLSPTEKVMTFNTCKGMI
AAQAGKHYPAPMVMVSSIEAACDLDRAGAMAIENQGFAKLAKTDAATAQIGLFLSDQVIK
GKAKKAGKIATKAINKAAVLGAGIMGGGIAYQSAYKGTPIVMKDIADSALDLGLTTAAGL
LVKQVERGRMKPAKMAGVLNAITPTLSYDNVKGVDIVVEAVVENPKVKGIVLAEVEGVVA
EDAVVTSNTSTISIDLLAESVKRKDKFCGMHFFNPVHKMPLVEVIRGKETSDETVAAVVA
YAAKMGKSPIVVNDCPGFYVNRVLFPYFAGFSHLVKEGADFTAVDKVMEKQFGWPMGPAY
LLDVVGIDTADHCTGVMSNGFPTRMQKIDDDPVSKMYANERFGQKNGKGFYDYGTDKRGK
PTKAPSETAYELIGNAQHTDFSADEIIARLMIPMVNEVVRCLEEGIVDTAAEADMGLIYG
LGFPPFRGGPIRYLETVGIANFIEMADKYAHLGEIYQVTDGMREMAASGKSYFTTDVKTA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttatttcaaggcaaaagccttactgccgaattacttgctgacggtattgttgaaatg
caattcaacgccgaaggttcagtcaacaaattcgatcaggcaacatttgaagagttcgtt
aaagttatcgacgcgatcaaaaactgtaacgaagcaaaaggtgtattagttacatcgggt
aagtcaacatttatcgttggtgctgacattactgagttcttagagacattcaaacgccca
gaagaagagttagtaccttgggttaaaaacgcgtcagacatcttcgacgcatttgaagat
ttagaattaccaacaatcgctgcggttaacggttttgctttaggcggcggttgtgaaatg
attttatcgtgtgattttcgtatcgctgacaccactgcatcaatcggtttaccagaagtt
aagctaggcttaatgccgggttttggtggtaccgttcgtttacctcgtctgattggtgca
gacaacgctgttgagtggatgtctacgggtaagccacacaagccagagcaagcacttaaa
gtgggtgtattagattcagtcgttgctcctgaaatgcttaaagaaggcgctatttcaatc
cttaaacaagcgattgacggcaagttagattggcgcgcaaaacgtcaacctaagctagaa
gcattaaagcttagcccaactgaaaaagtaatgacgttcaatacctgtaaaggcatgatc
gctgcacaagcaggtaaacactacccagcacctatggtgatggtaagctcaattgaagca
gcgtgtgatttagatcgcgctggcgcaatggccatcgaaaaccaaggttttgctaagctt
gcaaaaactgatgcggcaacggctcaaatcggcttattcttatctgatcaagtgatcaaa
ggtaaagcgaagaaagcaggtaaaattgccactaaagcaattaacaaagctgcggtatta
ggtgcaggtattatgggtggcggtatcgcttaccaatcagcatacaaaggcacgccaatt
gtcatgaaagacatcgcagatagcgcattagatttaggtttaacaacggctgctggcctg
ttagtgaaacaagtcgaacgcggtcgcatgaaacctgcaaaaatggccggcgtattaaat
gcgattacgccaacattaagctacgacaatgttaaaggcgtagatattgttgttgaagcc
gttgttgaaaacccgaaagttaaaggcatcgttttagctgaagttgaaggtgtggttgcc
gaagatgcagttgtcacttcaaatacatcaacgatttctatcgatttacttgccgaaagc
gttaagcgcaaagacaaattctgtggcatgcacttcttcaacccagtgcacaaaatgcca
ttagtagaagttattcgcggtaaagaaacgtcagacgaaactgttgctgccgttgttgcc
tacgcagcgaaaatgggtaaatcacctatcgtggttaacgactgccctggtttctacgta
aaccgtgtgttgttcccttacttcgctggttttagccaccttgttaaagaaggtgctgac
tttaccgctgttgataaagtgatggaaaagcaattcggttggccaatgggcccagcatac
ttactcgacgtagtaggtatcgacacagcggatcactgtactggtgtgatgtctaacggt
ttccctacgcgcatgcaaaaaatcgacgatgatccagtgagtaaaatgtacgcaaacgag
cgctttggtcagaaaaacggtaaaggtttctacgactacggcactgacaagcgtggaaag
ccaacgaaagcgccttcagaaaccgcttacgagttaattggcaatgctcagcacactgat
ttctctgctgatgaaattatcgcgcgtcttatgatccctatggtgaatgaagttgttcgc
tgtttagaagaaggtatcgttgatacagcagctgaagccgatatgggcttaatttacggt
ttaggtttccctccgttccgcggtggtccaattcgttacttagaaactgtcggtattgct
aatttcattgaaatggcagacaaatacgctcacttaggtgagatttaccaagtaacagac
ggtatgcgtgaaatggcagcttctggcaagtcatacttcaccacagacgttaaaacagct
taa
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