Thalassotalea sp. LPB0316: LP316_06200
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Entry
LP316_06200 CDS
T08426
Name
(GenBank) TIGR01621 family pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
thab
Thalassotalea sp. LPB0316
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thab03009
]
LP316_06200
03016 Transfer RNA biogenesis [BR:
thab03016
]
LP316_06200
Enzymes [BR:
thab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
LP316_06200
5.4.99.29 23S rRNA pseudouridine746 synthase
LP316_06200
Ribosome biogenesis [BR:
thab03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LP316_06200
Transfer RNA biogenesis [BR:
thab03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
LP316_06200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Anoctamin_N
Motif
Other DBs
NCBI-ProteinID:
QOL26881
UniProt:
A0A7L9S967
LinkDB
All DBs
Position
complement(1416059..1416745)
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AA seq
228 aa
AA seq
DB search
MIEVIAQHADYCVVYKPADVNFHDEGDIGQGFFNQAQKQLQCDALYPAHRLDKMTSGLVI
LAKNKASAAQFQQLFSQHKIDKFYLAISHQKPKKKQGTIKGDMAKSRRGAYKLLRTTNNP
AISQFFSHSLGQGQRLYLLRPLSGKTHQLRVALASIGAPILGDNLYAKGEHSESDRGYLH
AFRLSFNWQGEQQNYTCLPRQGRAFLTDDCQAQINQWLEPELLNWPKR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagtgattgcacaacacgcagattattgtgttgtttacaaaccggctgatgtt
aattttcacgatgaaggtgacatcggccaaggctttttcaatcaagcccaaaaacaattg
caatgtgatgcgttatacccagctcatcgacttgataaaatgacctcgggtttagtcata
ctagcgaaaaacaaagccagtgcggcgcagtttcaacagctttttagccaacataaaatt
gataaattttacctagcaattagtcatcaaaaacccaagaaaaaacaaggaacgataaaa
ggtgatatggcgaaaagtcgccgtggtgcctacaagttattacgcacaacgaacaaccca
gcgataagtcagtttttttctcatagcttaggacaaggtcagcgactttatttattgcga
ccattatcaggtaaaactcatcagttaagggtggcactagcaagtattggcgcgccaatt
ctcggtgacaacttatatgccaaaggtgagcacagcgagagtgacagaggctatttacac
gcctttaggttaagctttaactggcaaggcgaacaacaaaactatacctgcttaccccga
caaggtcgggcttttttaaccgacgattgccaagcgcaaattaaccaatggctagagcct
gaattgctcaattggcccaagcgttaa
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