Thalassotalea sp. LPB0316: LP316_07040
Help
Entry
LP316_07040 CDS
T08426
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
thab
Thalassotalea sp. LPB0316
Pathway
thab03410
Base excision repair
thab03430
Mismatch repair
thab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LP316_07040 (recJ)
03430 Mismatch repair
LP316_07040 (recJ)
03440 Homologous recombination
LP316_07040 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thab03400
]
LP316_07040 (recJ)
DNA repair and recombination proteins [BR:
thab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LP316_07040 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LP316_07040 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LP316_07040 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Caud_bapl16_4th
Motif
Other DBs
NCBI-ProteinID:
QOL27037
LinkDB
All DBs
Position
complement(1601124..1602854)
Genome browser
AA seq
576 aa
AA seq
DB search
MQRQIIQRPAVSDEHILAPLHPIIRQIYAQRGVKSDEELALQVANLADVNALDGIQQASD
ILYQVMLAKEKIFIIGDFDADGATSTALMMEGLSLFGYQNHEFLVPNRFEYGYGLSPEIV
EIAHQQGAQTLITVDSGISCHAGVEKAKTLGLTVIITDHHLPGNRLPCADAIVNPNLASC
QFPSKALAGVGVAFYLMLALRKTLREQNYFASVGINEPNIAQLLDLVALGTVADVVPLDA
NNRILVQQGLNRIRAGVTRPGIQALIEIAKRDQSQLVASDFGFALGPRINAAGRLDDMSF
GINCLLANDISSARMMAAELDGLNKSRREIEQGMQIEAEAIMSRLSFNQDNLPNAISLYQ
KDWHQGVIGIVAGRIKEKFHRPTIVFAPASEENISEIKGSARSIEGLHIRDLLEHIAGQH
EGIILKFGGHAMAAGLSIDVSRFEEFQRLFSHYAGLWIKEEDFQGKLYSDGQLPVSEMTI
EFAQLIRDAGPWGQHFPEPIFDDVFTLLQQRIVGEKHLKLMVQKDGVAFDAIAFNVDVKA
WPNHQASRVHLAYKLDINEFRGRKNLQLMVENIEAI
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagacaaatcattcaacgccctgcagtatccgacgagcacatccttgcaccatta
catcccattattagacaaatttatgcccagcgcggggtaaaaagcgatgaagagctcgca
ttacaagtagcaaacttagccgatgtgaatgcccttgacggcattcaacaggcaagtgac
attttataccaggtaatgctagccaaagagaaaatctttattattggcgactttgacgcc
gatggcgcgacttcaacggcgttaatgatggaaggactaagtttatttggctatcagaac
catgagttcttagtgcctaatcgttttgaatatggttacggcttgtctcccgaaattgtc
gaaatagcccatcaacaaggcgcgcaaacactgatcaccgttgatagcggcattagttgt
catgccggtgttgaaaaagcaaaaacgcttggtttaaccgtgatcatcactgatcaccat
ttgccgggtaatcgcttaccttgtgccgatgccattgttaacccaaacctcgccagttgt
cagtttccctcaaaagccttagcaggtgtcggtgtagccttttatttaatgctagctttg
cgcaaaacacttagagagcaaaactacttcgctagcgttggaataaacgagcccaatata
gcgcaactgcttgatttagtggcattaggcacggttgccgatgttgtgccactcgatgct
aataatcgcatattagtgcagcaaggtctcaatcgaattcgcgcaggtgtcacccggcca
ggtattcaagcgctgattgaaatcgccaagcgcgaccaaagccagttagtggccagtgat
tttggctttgccctcgggccaaggatcaacgccgctggccggttagacgatatgtctttt
ggcattaattgcttattagctaacgatatcagtagtgcgcgaatgatggcagctgagctt
gatggcttaaataaaagtcgccgtgaaattgaacaaggcatgcaaattgaagctgaggcc
attatgagccgcttgagctttaatcaagataatctccccaacgctatttcactttatcaa
aaagattggcatcaaggtgttatcggcattgttgcagggaggatcaaagaaaagtttcac
cgccctacgatcgtttttgcgccagctagtgaagaaaacattagcgaaataaagggctct
gcacgttcaattgaaggcctacacattcgcgatttacttgaacatattgccggccaacac
gaaggcattattctcaaatttggcggtcatgcaatggcggcaggcttatccattgacgtg
agtcgtttcgaagagtttcaacgtttgtttagccactatgccggtctttggatcaaagaa
gaagactttcaaggaaaactctattctgatggccagttacctgtcagtgaaatgaccata
gaatttgcccaactaatccgcgatgcaggcccttgggggcaacattttcctgagcctatt
tttgatgatgtatttaccttattacaacagcgtatcgtcggtgaaaagcatttaaagttg
atggtacaaaaagacggcgtcgcctttgatgcgattgcctttaatgttgatgtaaaagct
tggcctaatcaccaagcaagtcgtgttcaccttgcttataagctcgatatcaacgagttt
agaggtagaaagaatctccagttaatggtcgaaaatatcgaggctatttaa
DBGET
integrated database retrieval system
