Thalassotalea sp. LPB0316: LP316_07405
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Entry
LP316_07405 CDS
T08426
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
thab
Thalassotalea sp. LPB0316
Pathway
thab02020
Two-component system
thab02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LP316_07405
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LP316_07405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
thab03021
]
LP316_07405
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
thab02035
]
LP316_07405
Transcription machinery [BR:
thab03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LP316_07405
Bacterial motility proteins [BR:
thab02035
]
Flagellar system
Flagellar assembly proteins
Stator
LP316_07405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
GerE
Motif
Other DBs
NCBI-ProteinID:
QOL27106
LinkDB
All DBs
Position
1671856..1672575
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AA seq
239 aa
AA seq
DB search
MVKTQAYIDQIDKTALIEQQTVLVKRIAYHLMARLPASVQVDDLIQAGMIGLLEASNNFD
ASKGASFETFAGIRIRGAMLDEIRRGDWTPRSVHRNSRLISDTIKTLEAEHGRDVTDSEV
ADKLNVSLREYHDMLNEVSSGKIIGIEDLGVTEDAINFAHEATIDSPHDEIEHSAFKQAL
ATCITSLPERESLVLSLYYDEELNLREIGQVLDVSESRVSQIHSQAMHRLKARMQSWQN
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaaaacgcaagcgtatattgatcaaatagataaaactgctttaatagagcagcaa
actgtcttggttaaaagaattgcctatcatttaatggctcggttacctgctagtgtacag
gtagacgacttaattcaagccggcatgattggcttgcttgaggcgtcaaataactttgat
gcgagtaaaggcgcgagctttgaaacgtttgctggtattagaattcgcggtgctatgctc
gatgaaattcgtcgcggtgattggacgcccagatcagtacacagaaactcccgcctcatc
agtgataccatcaaaacattagaggctgaacacggtcgtgatgtaaccgatagcgaagtg
gctgacaaactaaatgtctcattgcgcgaatatcatgatatgcttaatgaagtaagctct
ggtaaaataataggtattgaagatcttggtgtgacagaagatgcaataaattttgctcat
gaggccacgatagatagccctcatgacgaaattgagcatagcgcttttaagcaagcgtta
gcaacttgtataacttctttacccgaacgtgaatctttagtgttatcattgtattatgac
gaagaactgaatttacgtgaaattggccaagtactcgatgtgagtgaatctcgagtaagc
caaattcacagtcaagcgatgcaccgattaaaagcgcggatgcaatcttggcaaaattaa
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