Thalassotalea sp. LPB0316: LP316_07955
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Entry
LP316_07955 CDS
T08426
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
thab
Thalassotalea sp. LPB0316
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thab03016
]
LP316_07955 (truB)
Enzymes [BR:
thab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LP316_07955 (truB)
Transfer RNA biogenesis [BR:
thab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LP316_07955 (truB)
Prokaryotic type
LP316_07955 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
YibY
HTH_PafC
Motif
Other DBs
NCBI-ProteinID:
QOL24320
UniProt:
A0A7L9S2U8
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All DBs
Position
1798789..1799748
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AA seq
319 aa
AA seq
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MAKRRKGRPVNGVVLLDKPYDISSNSALQRVKRIYFAQKAGHTGALDPLATGMLPICLGE
GTKFSQFLLDTDKTYQVTAKLGVRTTTSDVDGDIVSEKPVDVSQAQLFEALAHFRGDSKQ
VPSMFSALKYQGKPLYTYAREGIEIEREARDITVYRLDVLRFEGDEVDMEIHCSKGTYIR
TIVDDLGERLGCGAHVSALRRVGVGSYDRKDMVTLEQLDALLAQANEQDVAPSTLLDPLL
LPMNTALVGMPSVNIDDESARFLRLGNPVNAAGLPLDGFVQVYIERTENEEPEFIGVGIV
DDNGMLAPKRITVKEMLEC
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcgaagaaaaggccgtccggtaaatggtgttgtattactcgacaaaccttat
gatatttcttcaaactcggcactgcagcgtgttaaacgtatctactttgcacaaaaagca
gggcataccggggcactcgatccgttagcaacgggtatgttgccaatttgtttgggcgag
ggaactaagttctcacagtttctgctagatacagataaaacctatcaagtaacggcaaag
ttaggtgtgcgaacgacaacaagtgatgttgacggcgatatcgtgagtgaaaagcctgtt
gatgtttctcaagcacaactttttgaagcgttagcgcattttcgcggtgattcgaaacaa
gtaccgtcgatgttttcagccctaaagtatcaaggaaaaccgttatacacctatgctcga
gagggaatagagattgagcgtgaagctcgtgatatcactgtatatcgccttgatgttctt
cgctttgaaggcgatgaagtcgatatggaaattcattgctcaaaagggacgtatattcgc
accatcgttgatgatttgggtgaacgcttaggctgtggtgctcatgtcagtgctttacgt
cgcgttggtgtaggtagttatgaccgaaaggatatggtgaccctcgagcaacttgatgcg
ctattagcgcaggcaaacgagcaagatgtagcgccatcgacattactagatccgctactg
ttgccaatgaatacagcgctagtcggtatgccaagtgttaatattgatgatgaatcggca
cgttttttacgcttaggtaacccagttaatgctgctggcttaccattagacggttttgtc
caagtttatattgagcgaactgaaaacgaagaacctgagtttattggcgttggtattgtc
gatgacaatggcatgctagcaccgaaacggatcaccgtaaaagagatgttagaatgttaa
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