Thalassotalea sp. LPB0316: LP316_07970
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Entry
LP316_07970 CDS
T08426
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
thab
Thalassotalea sp. LPB0316
Pathway
thab03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LP316_07970 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
thab03019
]
LP316_07970 (pnp)
03016 Transfer RNA biogenesis [BR:
thab03016
]
LP316_07970 (pnp)
Enzymes [BR:
thab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LP316_07970 (pnp)
Messenger RNA biogenesis [BR:
thab03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LP316_07970 (pnp)
Transfer RNA biogenesis [BR:
thab03016
]
Prokaryotic type
tRNA degradation factors
LP316_07970 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
aRib
S1_2
KH_SLS1_2
MLTR_LBD
DUF5813
Motif
Other DBs
NCBI-ProteinID:
QOL24323
UniProt:
A0A7L9S1U8
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All DBs
Position
1801503..1803629
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AA seq
708 aa
AA seq
DB search
MFTPVTKTFQYGQHTVTLETGVIARQATAAVMASMDDTSVLVSVVAKKDAVEGQDFFPLT
VNYQEKTYAAGKIPGGFFKREGRPSEEETLIARLIDRPIRPLFPEGFTNEVQVIITVVSA
NPEIAPDIISLLGTSAALAITGAPFNGPVGAARVGYKDGQYLLNPLQSELETSQLDLVVA
GTESAVLMVESEAQVLSEDVMLGAVVYGHEQSQAAIKAIQEFAAEVNNPSWDWVAPEKNA
ELIAKIDELAADKVNEAYQITEKAARYERVAEIRTEVLAALTEQLGEELNEQEAKDLFHD
LEKKVVRGRITSGMPRIDGRDPEMIRALDVMTGILPRTHGSSLFTRGETQALVTATLGTA
RDAQKVETILGEKTDNFMLHYNFPPYCVGETGFIGSPKRREIGHGRLAKRGILAVMPTIE
EFPYAVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKSSVAGIAMGLVKEGDSHVVLS
DILGDEDHLGDMDFKVAGTTEGITALQMDIKIEGITKDIMQTALNQAKGARIHILKVMDE
AIAGARDDISEFAPRIHTMKINADKIRDVIGKGGATIRQLTEETGTTIEIEDDGTVKIAA
TDGKQAEDAIARIEAITAEIEVGKIYTGKVVRIVDFGAFVNVLPGKDGLVHISQISEERV
NAVTDVLSEGQEVTVKVLEVDRQGRVRLSIKEAAQKSAEETAPEAPAE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtttactccggtaactaaaacatttcaatacggtcaacataccgtaactctagaaaca
ggtgttattgcacgtcaagcaacagcagctgttatggcatcaatggacgacacgagcgta
ttagtttctgttgtggcgaaaaaagatgctgtagaaggtcaagatttcttcccattaacg
gtcaactatcaagaaaaaacatacgctgcaggtaaaatccctggtggtttcttcaaacgt
gaaggtcgtccatctgaagaagaaacgttaattgcacgtttaattgaccgtccaattcgt
ccgttattccctgaaggtttcacgaacgaagtacaagttattattacggtagtttctgct
aacccagaaattgcccctgatatcatttctttattaggtacgtctgctgcattagccatt
actggtgcaccatttaacggtccagtaggtgcagcacgtgttggttacaaagacggccaa
tacttattaaacccattacaatctgaattagaaactagccagttagatttagttgtagca
ggtactgaatcagctgtattaatggttgaatcagaagcgcaagtgttatcagaagacgtt
atgttaggcgctgttgtttacggtcacgagcaatcacaagccgctatcaaagcgattcaa
gaattcgcagctgaagtaaacaacccttcatgggattgggttgcacctgagaagaatgct
gagttaatcgcgaaaattgacgagttagctgcagacaaagtaaacgaagcgtaccaaatt
actgaaaaagcagctcgttacgagcgcgttgctgaaattcgtacagaagtattagctgct
ttaactgaacagttaggtgaagagctaaacgagcaagaagcgaaagacttattccacgat
ttagagaagaaagttgttcgcggtcgcattacttcaggtatgccgcgtatcgacggtcgt
gatcctgaaatgattcgtgcattagacgtgatgacaggtatattaccacgtactcacggc
tcttcattattcacccgtggtgaaacacaagcattagtaactgctaccttaggtacagcg
cgcgatgcacaaaaagttgaaactatcttaggtgaaaagacagacaacttcatgttgcac
tacaacttcccgccatactgtgttggtgaaacgggtttcattggttcacctaagcgtcgt
gaaattggtcacggtcgtttagctaagcgcggtatcttagccgtaatgccaactattgaa
gaattcccatacgcagttcgagtggtatcggaaatcactgaatcaaatggttcatcttca
atggcgtctgtttgtggtacatcattagcgttaatggacgcgggtgttccgattaagtct
tcagttgccggtattgcaatgggcttagttaaagagggcgacagccacgttgtactttca
gatatcttaggtgacgaagatcacttaggcgatatggactttaaagtagcgggtactacc
gaaggtattactgcacttcaaatggacattaagattgaaggtattactaaagatattatg
caaactgcgcttaaccaagcaaaaggtgcacgtattcatatcttaaaagtcatggacgaa
gcgattgctggtgcgcgtgatgatatctctgagtttgctccgcgcattcacacgatgaag
atcaacgctgacaagatccgtgacgttattggtaaaggtggcgcaacgattcgtcaactt
actgaagaaacgggtacaacaatcgaaatcgaagacgacggtaccgttaaaattgcggca
actgatggcaaacaagcagaagatgcaattgctcgtatcgaagcgatcactgctgaaatc
gaagtaggtaaaatctacaccggtaaagtagtacgtatcgtagatttcggtgcgttcgtt
aacgtattaccaggtaaagacggcttagttcacatttcacaaatctctgaagagcgtgta
aatgcggtaactgacgtattatctgaaggccaagaagtgacggttaaagtattagaagtt
gaccgccaaggccgtgttcgtttaagcattaaagaagctgctcaaaagagtgctgaagaa
acagctcctgaagcgcctgctgaataa
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