Thalassotalea sp. LPB0316: LP316_08400
Help
Entry
LP316_08400 CDS
T08426
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
thab
Thalassotalea sp. LPB0316
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thab03032
]
LP316_08400 (hupB)
03036 Chromosome and associated proteins [BR:
thab03036
]
LP316_08400 (hupB)
03400 DNA repair and recombination proteins [BR:
thab03400
]
LP316_08400 (hupB)
DNA replication proteins [BR:
thab03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LP316_08400 (hupB)
Chromosome and associated proteins [BR:
thab03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LP316_08400 (hupB)
DNA repair and recombination proteins [BR:
thab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LP316_08400 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QOL24391
UniProt:
A0A7L9S214
LinkDB
All DBs
Position
1885857..1886129
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIEKIAAGADISKAAAGRALDSFIEAVTEELKAGEQVALVGFGTFSVRDRAARTG
RNPQTGATIEIAAAKIPSFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtctcaactaatcgagaaaattgctgctggtgctgatatttctaaagctgct
gctggtcgcgcattagattcattcatcgaagctgtaactgaagaattaaaagctggtgag
caagttgcgttagttggttttggtacattctctgtacgtgaccgtgctgcacgcactggc
cgtaacccacaaactggtgccacaatcgaaatcgctgctgcaaagatcccatctttcaaa
gcaggtaaagcattaaaagacgcttgtaactaa
DBGET
integrated database retrieval system
