Thalassotalea sp. LPB0316: LP316_08885
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Entry
LP316_08885 CDS
T08426
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
thab
Thalassotalea sp. LPB0316
Pathway
thab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LP316_08885 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thab02000
]
LP316_08885 (msbA)
Enzymes [BR:
thab01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
LP316_08885 (msbA)
Transporters [BR:
thab02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LP316_08885 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
nSTAND3
RNA_helicase
DEAD
AAA_29
MMR_HSR1
RsgA_GTPase
AAA_16
DUF6236
AAA_25
AAA_18
APS_kinase
Zeta_toxin
AAA_15
DUF87
Wzy_C
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
QOL24481
LinkDB
All DBs
Position
2012954..2014738
Genome browser
AA seq
594 aa
AA seq
DB search
MRTTSKAAPDAVEQLNSKSKQVPKGTFKRLLGYMKVYKKGFIAAIIGMIGYASVDSFVFS
QLQPLIDDGLTGNNPDFMKWAPLFVVVMFILRGSFHFIGNYCLAWVGNHVVTDLRQELFQ
HIIKMPVSYHDKHSAGTLISKITYDTEQVLTASSKALLTLVQQGAFVTGLLIVMFYNSWQ
LSAIFLLLTPVIAVVVSAVSKRFRTISKNMQDTMGEVTTASEQTINGHKVVLTFDGHQRE
SERFAEVNKRNRQQRMKMVATKSSSVPVIQIIASFGLAFVLYMANSEMMRESLTPGSFTT
VITCMAMLLRPLKLLTTVNSEFQRGIAACASIFEVLDRETEKDTGTKALVRAQGNIAFDQ
VNFTYDGEERPALNNISFSVSTGQTIALVGRSGSGKSTLSSLLLRFYHADSGKVLIDGED
INQYKLHDLRHQFAYVSQQVVLFNDTIANNIAYGKPDASEEEIIAAAKSAHVWEFAEQLP
DGIHSNVGENGALLSGGQRQRVAIARAILCDAPFLILDEATSALDTESERHIQDALNTLQ
QNRTCLVIAHRLSTIENADNILVLEQGEIIEQGNHQTLIAQDGAYAQLHKLQFG
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacaacgtcaaaagctgcgcccgacgcagttgagcaattaaacagcaaaagtaaa
caagtgcccaaaggaacctttaaacgcttattaggctatatgaaggtctataaaaaaggc
tttatcgcggcgattattgggatgattggttacgcgtcggtggatagctttgtcttctct
caattacaaccgttaatcgacgatggtttaacaggcaataaccctgactttatgaaatgg
gcgccgctgtttgttgtggttatgtttattttgcgtggtagctttcattttatcggcaac
tattgtcttgcatgggtgggtaatcacgtggttaccgatttgcgacaagaactatttcag
cacattatcaaaatgccagtgagctatcacgataagcactctgctggtacgcttatttct
aaaattacttatgacactgaacaggtattaacagcttcaagtaaggctttgttaacgctc
gttcagcaaggcgcttttgttaccggcttattgattgtgatgttttataactcatggcaa
ttatcggctatttttctgttgctaacgccggtaattgcggttgtagttagtgcagtatct
aagcgttttcgcaccattagtaaaaacatgcaagacaccatgggggaagttacaaccgcg
tcagagcaaaccattaatggtcataaagtggtgttaacattcgatggtcaccagcgagaa
agtgagcgttttgctgaggttaataagcgcaatcgccagcaacgcatgaaaatggtggca
accaagtcgtcaagtgtgccggttattcaaatcattgcttcatttggtttagcttttgtt
ttgtacatggctaattctgagatgatgcgtgaatcattaacgccgggtagttttactacg
gttattacctgtatggcgatgttgttgcgtcccttgaagttattaacaacggtcaatagt
gaatttcagcgaggcattgcagcctgtgccagtatttttgaagtacttgatagagaaacc
gaaaaagatactgggacaaaagcactggttcgtgctcaaggcaatatcgcctttgaccaa
gtcaatttcacctatgatggcgaagaaaggccagcgcttaataatatttcattctccgtt
tcgacaggccaaaccattgctttagttgggcgctcaggttcaggaaaatccaccttgagt
tcattattgttgcgtttctatcacgccgacagcggtaaagtgttgattgatggcgaagat
attaatcaatacaagttacacgatctacgccatcagtttgcttatgtatctcagcaagtg
gtgctatttaacgacacaatcgccaataacatcgcttatggtaaaccagatgctagcgag
gaagagatcatcgcagcggcgaaaagcgcccatgtttgggagttcgctgaacaattacct
gacggtattcacagcaatgttggtgaaaacggtgctttgctctcgggcgggcaacgccaa
cgtgtcgcgattgcacgagcgattttatgtgatgcgccattcttaattttagatgaagca
acgtctgctttggataccgagtctgagcgtcatatccaagacgcactaaacaccttacaa
caaaaccgtacgtgtttagttatcgcccatcgtttatcgacgattgaaaatgccgataac
attttagtcctagaacaaggtgaaataatcgagcaaggcaatcaccaaacgctaatagcg
caagacggtgcctatgcgcaattacacaaattgcaatttggataa
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