Thalassotalea sp. LPB0316: LP316_10880
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Entry
LP316_10880 CDS
T08426
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
thab
Thalassotalea sp. LPB0316
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thab03009
]
LP316_10880
Ribosome biogenesis [BR:
thab03009
]
Prokaryotic type
ribosomal protein modification factors
LP316_10880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
GNA1162-like
Motif
Other DBs
NCBI-ProteinID:
QOL24824
LinkDB
All DBs
Position
complement(2444815..2447001)
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AA seq
728 aa
AA seq
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MEIKVNFLDNLRLEAKFDDFTVIADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCN
AREISTDNIRISQNNIVDPEDRYNQVFQINVELPESLSEKDKQGILRSIERCTVKKVVQT
GPEFKIETVENLDEDAQAMLMVDPDNQDNTYILGKDLPLEQTIANMTKILADLGMKIEVA
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKDSALCSALGEFIERLNCNFFYNDQFFGEE
IANSEFVHYPNEKWFELTQDDSLPNGLLDDYTKDIYNPDGELQGSHLIDTNSGNIERGIC
AIPYTRKSDGETVYFPSNLIENLFLSNGMSAGNNMAEAQVQCLSEIFERAVKKHIIEQEI
VLPDVPKEVLAQYPSIVDGIKGLAEQGFPVLVKDASLGGQFPVMCVTLMNPKTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPRPTFNSMAVQEPENFVEHFIDSTGVVSWRF
FSNQYDYDFVEWDFSGTNDEECETLFGILEALGKEAYIADFHLLGSSACRILVPDYSEVY
PVEDLIWDNTNKALLYREDILNLHRLTDDELASLVERLEQSELDVYIDIRTLIGIEFDEN
TDWGQLTILELKALIYLALGELEDAYDLVGEFLQYNDNTVERGLFYQAVHNVLDIALDED
LEIEHFIDNLNHMYGEQLMENVVGTVTGDVRFYGLAPTNMQLEGLNKHLRLIESYKKLHH
ARAQAAKR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagttaactttcttgataacttgcgcttagaagccaaattcgatgacttt
accgttattgccgatcaacctattcgctataaaggtgatggcagtgcccctagcccattt
gattactttttagcctcttctgcgctttgcgccgcatattttgttaaagtgtattgtaat
gcgcgagaaatctcgactgacaatatccgcatctcacaaaataacattgttgatccagaa
gatcgctacaatcaagtgtttcaaataaacgtcgaattacccgaaagtttaagcgaaaaa
gacaaacaaggcattttgcgctcaattgaacgctgcacggtgaaaaaagtggtgcaaact
gggcctgagttcaaaattgaaacggtagaaaacctcgacgaagatgcccaagcgatgttg
atggttgatccggataatcaagacaacacttatatcctaggtaaagacttaccgcttgag
caaaccattgccaatatgaccaagatcctcgccgacttggggatgaaaatagaagtcgct
tcatggcgcaatatcgtgcctaacgtatggtcactgcatattcgcgatgcagcctcacca
atgtgctttaccaatggtaaaggcgcaacgaaagacagcgcattatgttcagcactaggc
gaatttattgagcgcttaaactgtaacttcttctacaacgatcaattttttggcgaagaa
attgccaatagtgagttcgttcattacccgaatgaaaaatggtttgaattaacccaagat
gacagcctgccaaacggtttattagatgattataccaaagacatctataacccagatggc
gagctccaaggctcacacctgattgacactaactcggggaatattgagcgcggtatttgt
gctattccgtatacccgtaaatcagacggcgaaaccgtttactttccttctaacttgatt
gaaaacttatttttaagtaacggtatgagcgccggcaacaacatggcagaagcgcaagtt
cagtgtttatcggagatttttgaacgcgcggtaaaaaaacacatcattgaacaagaaatt
gtcctcccagatgtaccaaaagaggtgcttgctcaatacccaagcattgtcgatggtatt
aaaggcttggcagagcaaggttttccggtgttagtcaaagacgcatcgctaggcggccaa
ttccccgtgatgtgtgtcactttaatgaaccctaaaactggcggtgttttcgcctcattt
ggtgctcacccaagctttgaggttgcgttagagcgcagtttaactgagcttctacaaggc
agaagttttgaagggcttaacgatgttcctcgcccaacctttaactcaatggcggttcaa
gagccagagaactttgttgagcatttcattgattcgaccggtgttgtttcttggcgattc
ttttcaaatcaatacgattatgactttgtggaatgggatttttcaggcacaaatgacgaa
gaatgtgaaaccctatttggcattctcgaagcactcggtaaagaagcctacattgctgac
ttccacttactaggctcaagtgcttgtcgcatacttgtaccagattactcagaagtttac
cccgttgaagatttaatttgggataacaccaacaaagcattgctttaccgtgaagacatt
cttaacttacatcgcttaactgatgatgagcttgcaagccttgttgagcgcctagagcaa
tctgaacttgatgtttacattgatattcgcaccttaatcggtattgaatttgacgagaat
accgattggggccaactcaccattttagagttaaaagcactgatttatttagcactgggc
gaattggaagatgcctatgatttagttggcgagtttttacagtacaacgacaatacagtc
gagcgcggattgttttaccaagcagtacacaatgttttagatatcgccttagatgaagat
ttagaaattgaacattttatcgataatctcaatcacatgtacggtgagcaactgatggaa
aacgttgttggtacagtgaccggtgatgttagattttacggcttagcaccaaccaatatg
caattagaaggattaaacaagcatcttcgattaatcgaaagctataaaaaacttcatcat
gctagagcacaggcggcaaaacgctaa
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