Thalassotalea sp. LPB0316: LP316_11560
Help
Entry
LP316_11560 CDS
T08426
Name
(GenBank) class I SAM-dependent methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
thab
Thalassotalea sp. LPB0316
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thab03009
]
LP316_11560
Enzymes [BR:
thab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
LP316_11560
Ribosome biogenesis [BR:
thab03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LP316_11560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
MTS
TRM
Methyltransf_25
Methyltransf_15
TRM5-TYW2_MTfase
PrmA
Spermine_synth
Methyltransf_12
Methyltransf_10
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
QOL24938
UniProt:
A0A7L9S3T2
LinkDB
All DBs
Position
2587114..2588304
Genome browser
AA seq
396 aa
AA seq
DB search
MSAKIYLNIGREKSLKRKHPWVFSKAINKVKGKPLSGETVDVLDAKGNWLACGAYSEQSQ
IRVRIWSFDQNQTIDRNFFLQKLKDAQLRRDYFIAQGQLTGYRLIAGESDFLPGVTIDIY
DNIIVCQLLSAGADYQRYVLVDCLKELYPDHYIYERSDVDVRKKEGLALVTGWLTEPAPS
PEVVINEHGIKILVNVETGHKTGFYLDQRIARLTAGSYAKNKDVLNCFSYTGTFSLHCAA
NGAKSVTNVDVSQTALTLSEQNLALNGLQDANVSHVKEDVFKLLRQYKEQGKRFDMIILD
PPKFVDSKAALTRACRGYKDINMIAMELLNPGGLLLTFSCSGLLDAGLFQKVVADAALDA
NKTCHIVERTQQAHDHPISSNYPEGFYLKGLVCQIS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaaaatttatttaaatattgggcgtgaaaaatcgcttaagcgcaaacaccca
tgggttttctcgaaagcgattaacaaagtcaaaggtaagcccttatcaggggaaaccgtt
gatgtgcttgacgcaaaaggcaattggctggcttgcggtgcttactctgagcaatcacaa
attcgcgttagaatttggagtttcgatcaaaatcaaaccatcgatcgtaattttttctta
caaaaactcaaagatgctcaactacgacgcgactattttatcgcgcaagggcaattaacc
ggctatcgcttaattgctggtgaatctgacttcctacccggtgttactatcgatatttac
gacaatattattgtctgccaattactaagcgcgggtgccgactatcaacgctatgtgcta
gttgattgcttaaaggagttatatccagatcattacatttatgagcgcagcgatgtagac
gtgcgcaaaaaagaaggtttagcactagtcactggttggttaactgagcctgcaccatca
cctgaagtggtgattaacgaacacggcattaaaattttggtcaatgttgaaactggccat
aaaaccggcttttatctcgaccaacgcatcgccagattaacggctggtagctacgcaaaa
aacaaagacgtgcttaactgtttctcttacaccggtacattctcactacactgcgcagca
aacggagccaagtcagtgactaacgttgatgtatcgcaaacggcgctgaccctatcagag
caaaatttagcccttaacggtttgcaagatgctaacgtaagtcatgtaaaagaagatgtc
ttcaaactattgcgccaatacaaagaacaaggcaagcgcttcgatatgatcattttagat
ccgccgaaatttgttgattcaaaagcagcgttaacgcgcgcttgtcgcggctacaaagat
attaatatgattgcaatggagctgctcaaccctggcggtttactgttgactttttcttgt
tcaggtttgcttgatgcaggactatttcaaaaagtggttgccgatgccgcgctcgatgcc
aataaaacctgtcatattgttgagcgtactcaacaagcgcacgaccaccctatttcttct
aattatcctgagggcttttacttgaaggggttagtctgtcaaatttcgtag
DBGET
integrated database retrieval system
