Thalassotalea sp. LPB0316: LP316_12070
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Entry
LP316_12070 CDS
T08426
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
thab
Thalassotalea sp. LPB0316
Pathway
thab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LP316_12070 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thab03400
]
LP316_12070 (uvrB)
DNA repair and recombination proteins [BR:
thab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LP316_12070 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LP316_12070 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
CENPU
AAA_30
AAA_22
DUF87
Ish1
Motif
Other DBs
NCBI-ProteinID:
QOL25037
LinkDB
All DBs
Position
complement(2692574..2694577)
Genome browser
AA seq
667 aa
AA seq
DB search
MKKLTLESQYTPAGDQPTAIAQLLDGIEAGLAHQTLLGVTGSGKTYTVANVIQKLDRPTM
ILAPNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDSSVNEHIEQ
MRLSATKALLERRDVVIVASVSAIYGLGDPDSYLKMMLHLRQGDIINQRDILRRLAELQY
TRNDVAFTRATYRVRGDVIDIFPAESDRLALRVELFDEEIENIREFDPLTGEMERTLARV
TVYPKTHYATPRDKILSAIENIKIELKDRAKVLKDNNQLIEEQRIVQRTQFDIEMMNELG
YCSGIENYSRYLSGRAAGEPPPTLFDYLPPDGLLVIDESHVTVPQIGAMYKGDRSRKENL
VQYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPSQYELDKSNGEVAEQVVRPTGLLDP
EIEVRPVDTQVDDLLSEIRIRIAKQERVLATTLTKKMAEDLTEYLDEHGVKTRYLHSDVD
TVERMEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNVEGKAILYADTVTKSMRKAIDETNRRREKQAQYNLDNGITPKGVKRKISDVMDLGT
SNEELQQKAKQVAVPKAKYQTMSVAEIDKQVKVLEEKMFEHAKNLEFEHAAKVRDEINEL
RQVQLTH
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctaaccctcgaatcacaatacacacccgcaggagatcagccaacggcaatc
gctcagttacttgatggtatcgaagcaggtctagctcaccaaacgttattaggggttaca
ggatcgggcaaaacatatacggtcgctaatgtcattcaaaagctcgataggccaaccatg
attctcgcgccaaacaaaacattagcagcccagctatacggtgagatgaaggagtttttc
ccaaataacgcagtagaatattttgtttcctattatgattactatcagcccgaggcctat
gtgcccacgaccgatacttttattgagaaagactcttcggtaaatgagcatattgagcaa
atgcggttatctgcaaccaaagcactccttgagcgcagagatgttgtaattgttgcatcg
gtatcagccatttatggtttgggcgacccagattcctacttaaagatgatgttgcattta
cgccagggagacatcataaatcaacgtgatattttacgtcgcctcgccgagctacaatac
acccgaaatgatgtggcttttactcgagcaacgtatcgcgttcgcggtgatgtcattgat
atttttcctgctgaatcagatcgcctagcgctacgagtcgagctgttcgatgaggaaatc
gaaaatattagagaatttgatccgctaaccggtgaaatggaacgcacacttgcccgtgta
acggtataccctaaaacccattatgcaacaccgcgcgataaaatattatcagcgattgaa
aacatcaagattgagttaaaagacagggcaaaagtattaaaagacaataaccagttaatt
gaagagcagcgcatcgttcagcgcactcagttcgacatagaaatgatgaatgagctcggt
tactgctcagggattgaaaattactcgcgatacctatctggtagagccgccggcgaacca
ccacctactttattcgactacttaccccctgatggcttattagtcatcgatgaatcgcat
gtgacagtaccgcaaattggtgccatgtataaaggtgaccgatcgcgcaaagaaaattta
gtccaatatggctttagattgccatctgcacttgataaccgaccactaaagtttgaagaa
tttgaagctttagcgccgcaaaccatttatgtctcggcaacacctagccaatatgaactt
gataaatctaatggtgaagtggcagaacaagtcgttcgaccaacgggtctacttgatcct
gaaatagaagtgcgaccagtagatacccaagttgatgatctgttatctgaaattaggatc
agaatcgcgaaacaagagcgtgtgttagcgacaacgttaaccaaaaaaatggcggaagac
ttgaccgagtatctagatgaacacggtgttaaaacccgctacttgcattcagatgttgat
actgttgaacgcatggagatcattcgggatttacgtttgggcaagtttgatgtactcgtt
ggtattaacctgttgcgggagggcctagatatgccagaggtttctctcgttgctattctc
gatgctgacaaagagggctttttacgctctgaacgttctctaattcaaacaattggccga
gcggctcgcaatgttgaaggcaaggccattctctatgctgatacggtaacaaagtcgatg
cgcaaagctattgatgaaaccaaccgccgacgcgaaaaacaagcgcaatacaatctcgat
aacggcattacaccaaaaggtgttaagcgcaaaattagcgatgtaatggatcttggtaca
tcaaatgaagagttacaacaaaaagccaaacaggtagcagtgccaaaagctaagtatcaa
accatgtcggttgctgagattgataagcaagtaaaagtgcttgaagagaaaatgtttgaa
catgctaaaaacctagagtttgaacacgccgcaaaagtccgcgatgaaattaatgaacta
aggcaagtgcagttaacacattaa
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