Thalassotalea sp. LPB0316: LP316_12980
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Entry
LP316_12980 CDS
T08426
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
thab
Thalassotalea sp. LPB0316
Pathway
thab03030
DNA replication
thab03430
Mismatch repair
thab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LP316_12980 (dnaQ)
03430 Mismatch repair
LP316_12980 (dnaQ)
03440 Homologous recombination
LP316_12980 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thab03032
]
LP316_12980 (dnaQ)
03400 DNA repair and recombination proteins [BR:
thab03400
]
LP316_12980 (dnaQ)
Enzymes [BR:
thab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LP316_12980 (dnaQ)
DNA replication proteins [BR:
thab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LP316_12980 (dnaQ)
DNA repair and recombination proteins [BR:
thab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LP316_12980 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QOL25200
LinkDB
All DBs
Position
complement(2874432..2875166)
Genome browser
AA seq
244 aa
AA seq
DB search
MGHPTEKQQERLVILDTETTGINPREGHRIVEIGCVEMINRQLTGRNYHVYINPQFEMEQ
EVIDVHGLTNEFLADKPLFADVAQDFIDFIHGAELVIHNAKFDVGFMDHEFNMVGRGLPN
TADICKITDTLMTSKDEFGSPKTLDFLAKHYRVDGLIDRTYHGALIDAQLLAFVYIEMTR
RQETLNLSSGAEQSGDKNAIIRLSLDRKPLKVVRASADELTEHQARLDIVADKGSEPIWR
KREQ
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgggacacccgacagaaaaacaacaagaaagactcgttattctagataccgaaacaacg
ggtattaacccaagagaaggtcacagaattgtcgaaattggctgtgttgaaatgatcaac
cgccaattaactgggcgcaattatcacgtttatatcaatccgcaatttgaaatggaacag
gaggttatcgacgttcacggtttaaccaatgaatttttagcggataaaccgttgtttgct
gatgtcgctcaagattttattgattttattcacggcgctgaactggttattcacaacgcc
aaattcgacgttggctttatggatcacgagtttaatatggttggccgaggcttgccgaat
acagcggatatttgcaaaatcaccgataccttgatgacgtcaaaagacgagtttggctcg
cctaaaaccttagactttttggcaaagcattatcgcgttgatggcttaattgaccgtact
tatcacggcgctttgatcgatgctcaattgttggctttcgtttatatcgaaatgacccga
aggcaagaaactttgaatttaagttctggcgcagagcaatcaggtgataaaaatgccatt
attcggttgtcgctggatagaaaaccactaaaggttgttagggcttctgccgatgaatta
actgagcaccaagccaggttagatatagttgcagataaagggagcgagcctatatggcgc
aaaagagaacaataa
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