Thalassospira marina: CSC3H3_01170
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Entry
CSC3H3_01170 CDS
T05224
Name
(GenBank) hypothetical protein
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
thac
Thalassospira marina
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thac03000
]
CSC3H3_01170
Transcription factors [BR:
thac03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CSC3H3_01170
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Paralog
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_30
Motif
Other DBs
NCBI-ProteinID:
AUG51473
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Position
267176..268054
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AA seq
292 aa
AA seq
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MQQLSTRHLIAIIAICEAGSVTAAAAELNVTQPALSATIRQAEEIVGIALFDRTSRRAKP
TSAGLALIPEARRILTDVSRATQQLRDLAEGRIGHLSIASLPSAIAEIVAPALRRFVAEY
PGIRVAVRDALNTEVARAVKSGEADLGFGVPAEDENNLKTKMLFEDRFIAVLPAGHFLGD
RETVSWEDLRSETLIEGAKGSNTRASVREHLKVEGVGSAIECSFVPTTIGMVRNGLGVSV
LSELACRIFANDDQIALRPLLPIVTRPISILQRADRDLSPAAQLFMNFLEFS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagctttcaacacgacatctcattgcaattattgcgatttgtgaggcggggtct
gtcaccgcggcggcggcggaactcaatgtcacacaacccgcgcttagtgcgaccattcgg
caggcagaagaaatcgttgggattgcgctctttgaccgcacctcgcggcgtgcaaaaccg
acctcggccggccttgctttaatccccgaagcccgtcgtattcttacagatgtatcgcgt
gcaacccagcagctcagagaccttgccgaagggcgtattggtcatctttcaatagcctct
ttgccttcagcgattgctgaaatagtggcgcctgcattgcgtcgatttgtggcggaatat
cctggcatcagggtggctgtgcgtgatgcccttaacaccgaagttgcgagagctgttaag
tctggtgaggctgatctcggatttggtgttccggccgaggacgaaaacaatctgaaaaca
aaaatgctgtttgaagatcgtttcattgctgttcttccagcgggtcattttctgggtgat
cgagaaaccgtatcctgggaggatttacgctcagaaacgttgattgaaggtgccaagggg
tcgaacacacgtgccagcgtgcgtgaacacctgaaggtcgaaggtgtcggcagcgcgata
gaatgttctttcgtcccaacgacgataggtatggtgcgcaatggtcttggggttagcgtt
ctttcggagttggcgtgtcgaatatttgccaatgacgatcagattgctttacgtcctttg
ttgccgatcgtcacaaggccgatttctatcttgcagcgcgctgaccgggatctgagtcct
gcggctcagctgtttatgaactttcttgaatttagctga
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