Thalassospira marina: CSC3H3_01735
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Entry
CSC3H3_01735 CDS
T05224
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
thac
Thalassospira marina
Pathway
thac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CSC3H3_01735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thac03400
]
CSC3H3_01735
Enzymes [BR:
thac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSC3H3_01735
DNA repair and recombination proteins [BR:
thac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CSC3H3_01735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Zn_ribbon_PriA
Helicase_C
MarR_2
AAA_30
AAA_16
DUF4796_N
Zn_ribbon_6
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AUG51567
LinkDB
All DBs
Position
401374..403587
Genome browser
AA seq
737 aa
AA seq
DB search
MCAAKAITGNLFERRTVSVLPPLPLAGPYDYVVPEGLDIQPGDFVEIPLGRQTQRGVVWG
DARGDVDPAKLREIYGVLPAAPMPAVTRRFIDWVSAYTLSPQGAVLRMAMSVTDALEAPK
PVFRFGLAHGMAESQGNMRMTPARKRILSLLADHPSLEQGDILQETGTSASVLKGLVDAG
VIRREQVAPPSPFALPDLSIPRPDLSLDQEKAADFLCEKVDAGGFSAILIDGVTGSGKTE
VYFEAVRAALAQGKQVMVLLPEIALSAQWLQRFRDRFGVEPALWHSEVGQARRRETWRAV
ADGSARLVVGARSALFLPYRDLGLIVVDEEHEHAFKQEDGVIYHARDMAVARGHLGGFPV
MLASATPSLETLANVEAGRYERVVLGQRHGVAVLPSVEIVDIRVDKPERQRWITPTLKQR
LMETFAAGEQAMLFLNRRGYAPLTLCRACGHRFQCPNCTAWLVEHRAWGKLQCHHCGYSA
KIPDACPACGAEEKLAPCGPGVERLYEEAIQTFPDLKIEVATSDNIAGPKAAAALVGRVH
NQEVDLLIGTQILAKGYHFPMLTLVGVIDADLGLAGGDLRAAERSYQLLTQVAGRAGRGE
RPGTVLLQTADPSNRVIKAIAAGDRDAFDQVELAERMKYGMPPHGKLAALIVSGKKENEV
DEAAWRIGRVAPRGDGIVVLGPAPAPLSLLRGRFRRRFLLRTDKSVKVQAVIQDWLSRVK
TPGSVRVQIDIDPYSFM
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgccgcaaaggccataacgggaaatctgtttgaacgacgcactgtttccgtgctg
cctcccctgccgctggcggggccctatgactatgtcgttcccgaaggccttgatattcaa
cccggtgattttgtcgaaattccgctgggacgtcaaacccagcgtggtgttgtctggggt
gatgccaggggtgatgttgaccctgccaaactgcgcgaaatttatggggtgctgcccgcc
gccccaatgcccgctgtaacgcgccgctttatcgactgggtatcggcctacacccttagc
ccgcagggcgccgtgctgcgcatggccatgagtgtcaccgacgcccttgaagcccccaag
ccggttttccggttcgggctggcacatggcatggccgagtcgcaaggcaatatgcgcatg
acaccggcgcgcaaacgtattttgtcgctgctggcggatcatccatcgctggaacagggc
gatatcctgcaggaaaccggcaccagcgccagcgtattaaaggggctggttgatgcaggc
gtcatccggcgcgaacaggtggccccgccatcgccctttgccctgccggatttatccatt
ccccgccccgacctgtcgcttgatcaggaaaaggcagcagattttttgtgtgaaaaggtc
gatgcaggcgggttttcagcaatcctgattgatggtgtaaccggttcgggcaagaccgag
gtttattttgaagccgtccgggccgccctggcacagggaaagcaggtgatggtcctgttg
cctgaaattgccctgtcggcacaatggctgcagcgttttcgtgaccgctttggtgtggaa
ccggcactttggcattccgaagttggccaggcacggcggcgcgaaacctggcgcgcggtg
gccgatggcagcgcgcggctggtggttggcgcgcgatcagccctgtttttgccttatcgc
gaccttggcctgatcgtggtggacgaagaacacgaacatgccttcaagcaggaagatggc
gtcatttaccatgcccgtgatatggcggtggcgcgcgggcatctgggcgggtttccggtg
atgctggcatctgccacgccctcgcttgaaacgttggcaaatgtggaagctggccggtac
gaacgtgtggtgttgggccagcgccacggggtggccgtgctgcccagtgtagagattgtt
gatatccgcgtggacaagcccgaacgccagcgctggataacgccgaccctgaaacaaagg
ctgatggaaacctttgctgcgggcgagcaggcgatgctgtttttgaaccggcgtggctat
gcgcccttaaccctgtgccgggcctgtggacatcgtttccaatgccccaattgcacggcc
tggctggtggaacatcgcgcctggggcaagttgcagtgccatcattgtggctattcggcc
aaaatccccgatgcctgcccggcctgcggggccgaggaaaagctggccccctgcgggccg
ggggtggaacgcctgtatgaagaagcgatccagaccttccccgatttgaaaatcgaggtc
gccacatcggataatattgccgggccaaaggccgcggctgctctggtgggccgggtgcat
aaccaggaagttgaccttctgataggtacgcagatccttgccaagggctatcatttcccc
atgctgacgctggtgggcgtgattgatgccgatctggggctggcggggggcgatttgcgc
gccgccgaacgcagctatcaattgctgacccaggtggccggccgtgccgggcgtggcgaa
cgaccaggaacggtactgttgcaaacggcagatccgtcaaaccgcgtgatcaaggcgatt
gcggccggggatcgtgatgcgtttgatcaggtcgagcttgcggaacgcatgaaatatggc
atgccgccgcacggcaaactggctgccctgattgtttcgggcaaaaaggaaaacgaagta
gacgaagccgcctggcgcattggccgggttgcgccgcggggggatggcattgtcgttttg
gggccagcacccgccccattatcgctattgcgcgggcgctttcgtcgccggtttttgctg
cgcaccgataaatcggtcaaggtgcaggcggtgatccaggattggctcagccgggtgaaa
acgccgggcagcgtgcgcgtccagatcgatatagacccctacagctttatgtaa
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