Thalassospira marina: CSC3H3_02365
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Entry
CSC3H3_02365 CDS
T05224
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
thac
Thalassospira marina
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
thac03036
]
CSC3H3_02365 (smc)
Chromosome and associated proteins [BR:
thac03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
CSC3H3_02365 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
SMC_hinge
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AUG51681
LinkDB
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Position
533227..536760
Genome browser
AA seq
1177 aa
AA seq
DB search
MVQFKSLRLTGFKSFVDSTELLVEDGLTGVVGPNGCGKSNLVEALRWVMGETSAKQMRGS
DMSDVIFGGTSTRPARNVAEVSVVLDNSEHRAPAMFNDHEELEVVRRIERGGGSNYKVNG
KDVRARDVQLLFADAATGARSNAMVSQGKIGALIGAKPSQRRLVLEEAAGITGLHSRRHE
AELRLKNAEQNLERLEDVLVTLDSQITSLQKQARQAQRYRKLSESIRQTEALLFHIRWQE
AAKRQQDARELLVAGESAVRDLTGEVTRATTEQAHIAASLPDLRKQEAEASAALQRLVIE
REGLDKEKQQIETQMAQLRARIQQIDADLSREAELANDAQGALDKLKRERQDLRDAQGGE
DDELDDARERVAEKALRVEELEGLVDELTSRAAAEEARLKSVQQRLSELGARRIRLTDRY
DEAVAKLDDIRVEADFSDALEDAEMALEECEETVEQRKMAIEEAEMRVAELHDREDAAKI
AENQARDAQRDVESRLARLRAEIEALEGLVKGSGDGQYSPIIEQITVQGGLELAVAAALG
EDLDAPDAPEAPTHWAGVDPLPDDPALPENVQALAKFVQAPALLNRRLWQIGVVDDDSTG
NWLCKELKTGQRLVSRDGSLWRWDGYRILAGAELPAAVRLRQRNRLDELRAERDEIEDLV
EESVERAELARETLERLNEEIAEARAAEQEAHRAAREADGQLSRAREEIANIKRDASAIE
SRLQAAEDVVNRTRQDLDELIAEQEELAATPQESSDGLIEIKAELNEKRADLSDARADQM
ESRSQLERMQRDMSGRRKRLEFVENEIATWNERASGAGDRVAQLRERQEEAQMELEELEL
RPDEIEERRAVLTDRVGLAEQERKDSADRLVSAETAQRDADQALKDAEQKLAEAREGRVR
CEALLEQAEQHRRDLIERIRERVNATPDQLPELAMLDQNEELPSEADIEARLGRQTRERE
NLGAVNLRAEVELAEMEEQKNTLVTERDDLLAAIDKLRNGISQLNREARQRLNKAFEEVD
KHFQQLFVRLFGGGHAHLMLTEADDPLNAGLEIMASPPGKKLQHLSLLSGGEQALTAMAL
LFAVFMTNPAPICVLDEVDAPLDDANVDRFCRLLEAIGRHANTRFMVITHHRMTMARMNR
LFGVTMAERGVSSLVSVDLRQAEVYSQKEQHELDLTS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
ttggtccaattcaagtcgctgcgactgacggggtttaagtccttcgtcgattcaaccgaa
ttgctggtcgaagacgggctgacaggtgttgtcggtccgaatggctgtggcaaatccaat
ctggttgaagcgctgcgctgggtgatgggcgaaacatcggccaagcagatgcgtggctcg
gatatgtccgacgttattttcggcggcacatccacacgtccggcccgcaatgtggccgaa
gtttccgtggtgctggacaacagcgaacatcgcgccccggcaatgtttaacgaccacgag
gaacttgaagtcgtccgccggatcgaacggggcggcggttccaattacaaggttaacggc
aaggatgtccgtgcgcgtgacgtacagcttctgtttgcggatgccgcaacaggggcgcgg
tccaacgccatggtgtcgcagggcaaaattggcgcgctgatcggggcaaaaccctcgcaa
cggcgcctggtgctggaagaagccgccgggattaccggcctgcattcacgccggcacgag
gccgaactgcgcctgaaaaatgccgaacagaatcttgaacgtcttgaagacgttctggtg
acgcttgatagccagattacttcgctgcaaaagcaggcccggcaggcccagcgttaccgc
aaattaagcgaaagcatccgccagaccgaagccctgctgtttcatattcgctggcaggaa
gctgccaagcgccagcaggatgcccgagaattgctggtggccggtgaatcagccgtgcgt
gatttgaccggcgaggtcacccgcgccaccaccgaacaggcccatattgccgccagcctg
cccgatttgcgcaaacaggaagccgaagccagtgctgccctgcaacgcctggtgatcgag
cgtgaaggcctggacaaagaaaagcagcagatcgaaacgcagatggcgcagcttcgcgcc
cgcattcagcaaattgatgccgacctttcccgtgaagccgaactggcaaacgatgcgcaa
ggcgcgttggacaagctgaaacgcgaacgccaggatttgcgcgacgcccagggcggcgaa
gacgacgaactggatgatgcccgcgaacgcgttgccgaaaaggccctgcgcgttgaagaa
ctcgaaggtctggttgacgagctgaccagccgggccgctgccgaggaagcccgccttaaa
tcggtgcagcagcgtttgtccgaactgggtgcacgccgcatccgcctgacggaccgttac
gacgaagccgttgccaagctggatgatattcgcgttgaagccgatttcagcgatgccctt
gaagatgccgaaatggcgcttgaggaatgcgaggaaacggttgaacagcgcaaaatggca
atcgaagaagccgaaatgcgcgtcgccgaattgcatgaccgcgaagatgccgccaaaatt
gccgaaaatcaggcccgggatgcccagcgcgatgttgaatcgcgccttgcccgcctgcgt
gccgagatcgaagcccttgaaggcctggtcaaaggcagcggcgatggtcaatattccccg
atcattgaacagatcacggttcagggtgggctggaactggcggtggctgctgcccttggc
gaagaccttgacgcacccgatgcccccgaagcgccaacccattgggccggggtggacccg
ctgcccgatgacccggcattgcctgaaaatgtccaggcgctggcgaaatttgtgcaggcc
ccggcattgcttaatcgccgcctgtggcaaattggcgtggttgatgacgactccaccggt
aactggctgtgcaaggagcttaaaaccgggcagcggctggtctcacgggatgggtctttg
tggcgctgggatgggtatcgtattctggccggggcggaactgcccgcagcagttcgcctg
cgccagcgcaaccgcctggatgaattgcgtgccgaacgcgacgaaatcgaagatctggtt
gaagaaagcgttgagcgtgccgaactggcgcgtgaaacgctggaacgcttgaacgaggaa
attgccgaggcccgtgcagccgagcaggaagcccaccgtgccgcgcgcgaggccgatggc
cagctttcacgggcacgcgaggaaatcgctaatatcaagcgcgatgccagtgccattgaa
agccgcctacaagccgccgaggacgtggtgaaccgcacccggcaggacctcgatgaactg
attgccgaacaggaagagctagccgccaccccgcaggaaagcagcgatggcctgatcgag
attaaggccgaactgaacgaaaaacgcgctgatctttctgatgcacgcgccgaccagatg
gaatcacgcagccagcttgaacgcatgcagcgcgatatgtcggggcggcgcaaacggctg
gaatttgttgaaaacgaaattgccacctggaatgaacgtgcgtcgggggcgggggaccgt
gttgcccagctgcgcgaacgccaggaagaagcgcagatggagcttgaagagcttgaactg
cgccccgacgaaattgaagaacgccgagccgttttgaccgaccgtgtcggcttggccgaa
caggaacgcaaggatagcgcggatcggcttgtcagcgcggaaacagcgcagcgcgatgcc
gaccaggccctgaaagatgccgaacagaaactggccgaagcccgcgaagggcgtgtgcgc
tgcgaggccttgttagagcaggccgaacagcaccgccgcgatttaatcgagcgtattcgc
gaacgcgtaaatgccacccctgatcagttgccggaactggcaatgcttgatcagaatgaa
gaactgccatccgaggccgatattgaagcccgccttggccgccagacacgtgaacgcgaa
aatctgggggcggttaacctgcgtgccgaggttgaactggccgagatggaagaacagaaa
aacacgctggtaaccgagcgcgacgacctgctggctgcgattgacaaattgcgcaatggg
atcagccagcttaaccgtgaagcgcgtcagcgcctgaataaggcgtttgaggaagtcgac
aagcatttccagcaattgttcgtgcggctgtttggcggggggcatgcacatctgatgctg
accgaagccgatgatccgttaaatgcggggctggaaatcatggcctcaccgccgggcaag
aagctgcagcatctttcgctgctatctggtggggaacaggcattgacggcgatggcgctg
ctctttgcggttttcatgaccaatccggcgccgatctgcgtgcttgacgaagttgacgcc
ccgctggatgacgccaacgttgaccgtttctgccgtctgcttgaggcgattggccgccac
gccaatacccgattcatggttattacccaccaccgtatgacaatggcgcgaatgaatcgc
ctgttcggtgtgacgatggcagagcgcggtgtatcctccctggtgtcggttgacctgcgc
caggcggaagtttattcgcaaaaagaacagcatgagctggatttgaccagttag
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