Thalassospira marina: CSC3H3_02590
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Entry
CSC3H3_02590 CDS
T05224
Name
(GenBank) hypothetical protein
Organism
thac
Thalassospira marina
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_4
Big_9
Cadherin_3
Cadherin_5
DUF4347
Ig_SibA
Cadherin
Motif
Other DBs
NCBI-ProteinID:
AUG51720
LinkDB
All DBs
Position
581497..589644
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AA seq
2715 aa
AA seq
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MLMYMFRVVCVGVAMAHRFFSSRLISELEPRVMFDGAGAIVADTVLGDADSTAVDQHVQD
TQDATAASDAFNSQGAQLATGSPVDGASADSVADAGTTDGSATLDSASISDIAITDLGGV
DASVALTPREVVIYDPSIDGLDDLLSQLDGNTLVFALDSGEDALSQIARIMSEVGSVSGL
HIVSHGDDGAIELGGKTITTETLLGSSDVLASWQTSMTADADILLYGCEVGDGVAGQAFL
HTFSALTGADVAASDDVTGLAALGGDWDLEVHVGAIETSVLAPLSGYQGVLTTAMSAAST
NFAEVLKGGSFDPGQDTQATAAVDLVGDASNAMLYIKYDDNGTTGTTSDDEIYFRLRTDH
SADKSQGFSGYAWMGMDVDGDGDLDAFLMAFGTSQGFSINVYSAGTGANNSPSTTSLDSQ
NPVAIVTKEAVSVDATGSVLNYSSSASSYFGRVADIDSGANGNIDNDGDTDYFLTFKVNA
DNFFSKVNTLKVTGGGGALISSINGNTGINKDTNLRFVVATAQQANSLNGDMGGINDGTA
DKTATYSSLGMFVTGSLGNPETLSTGTGTAPTITVGDLSFTEGNSATQIDTGASASDSNG
DTDWDTNSKMEVQLTSNAESTDQLAIATNGNFTISGGNLSHNGTVIGTVSETSGTANDGI
VTGSDKLTINFNSNATNAIVQELARSITFFNSSENPLALARIATFTLTDKGGLTGSDTST
ISVTPVNDAPTASNNTVTTAEDTPKVFAAADFNFSDVDGNSLASVQITTLETKGSLQYNS
GGTWVDVTLNQVITKADIDAGKLRFSPLANDSGTSYTSFDFKVSDGTVYSVSAYTMTVDV
TPVNDAPTAANNTVTTNEDTAKVFAASEFNFADVDGDSLAKIQITTLETNGTLQYQSGGN
WVDVTLNQEISKADIDLGNLRFMPAANANGSSYDSFGFKVSDGSVYSSSAYTMTVDVTAV
NDAPTAANNTVTTNEDTAKVFTASEFNFADVDGDSLAKIQITTLETNGTLQYQSGGNWID
VTLNQEISKADIDNGNLRFMPAANANGSSYDSFGFKVSDGSVYSSSAYTMTVDVTPVNDV
PTAANNTVTTNEDTAKVFTASEFNFADVDGDSLAKIQITTLETNGTLQYFNGTSWVDVTL
NQEISKADIDNGNLRFMPAANANGTGYDSFEFKVSDGTDYSASAYTMTVDVTPVNDVPAG
ADNTVITAINTPKVFASSDITFNDVESTDYSKIQITALETSGTLQYFIGTSWVDVTLNQE
FTKADIDNGNLRFVPVNNASGQGYDSFEFKVSDGTAYSSDAYTMTIDVTGSIAPTISVAD
LSFTEGDGATAIDGSATASDSDGDSDWDASAKLEVQLTANAQSSDSLSIATSGNFSISGS
NLLYNSTIIGTIEETSGTANDGVVSAGDKLTINFTSNATNAIVQELTRSITFNNSSENPD
TSARTATFTLTDKTGSSGSDTATITVAAVNDAPTAANNTVTTNEDTAKVFTASEFNFADV
DGDSLAKIQITTLETKGSLQYFNGTSWVDVTLNQEISKADIDNGNLRFTPAANANGSSYD
SFGFKVSDGNAYSSSAYTMTVDVTAVNDAPTAANNTVTTNEDTAKVFAASEFNFTDVDND
PLAKVQITTLETKGSLQYFNGTSWVDVTLNQEISKADIDNGNLRFTPAANANGSSYDSFG
FKVSDGSVYSSSAYTMTVDVTAVNDAPTAANNTVTTNEDTAKVFAASEFNFADVDNDPLA
KVQITTLETKGSLQYFNGTSWVDVTLNQEISKADIDNGNLRFTPAANANGSSYDSFGFKV
SDGNAYSSSAYTMTVDVTAVNDAPTAANNTVTTNEDTAKVFTAGEFNFADVDNDPLAKVQ
ITTLETKGSLQYFNGTSWVDVTLNQEISKADIDNGNLRFTPAANANGSSYDSFGFKVSDG
SVYSSSAYTMTVDVTAVNDAPTAANNTVTTNEDTAKVFAASEFNFADIDNDPLAKVQITT
LESKGSLQYFNGTSWVDVTLNQEISKADIDNGNLRFTPAANANGSSYDSFGFKVSDGNAY
SSSAYTMTVDVTAVNDAPTAANNTVTTNEDTAKVFTAGEFNFADVDNDPLAKVQITTLET
KGSLQYFNGTSWVDVTLNQEISKADIDNGNLRFTPAANANGSSYDSFGFKVSDGSVYSSS
AYTMTVDVTAVNDAPTAADKTLSTTYEKPVVIQTSDLGYGDTEGSALTKIRITTLEAAGQ
LQYYNGTSWVDVTLNQEISKADLDAGNLRFSPAQGGSGNAYANFKFQVHDGTDYSATPNT
ITFNVGPNTAPAVTSNGGGSTATISVSENQTAVTTVTATDAENQNLTYSISGGEDGAKFS
INSATGALVFKAAPDYENPTDIGANNTYIVEVSVSDGNGGVTKQLITVNVTDVPETVYIP
PVAPTPAPVPTPAPTPAPTPAPAPVIATPPAQTPLTPEPTNQQQGPVNDPTIITTGNGPG
FSTVVFTGQGTSQQTVQNIAISVSSVVSTTTTATTSSSTTQGENAQNGQNGQTGPNAQGA
NGQGNQTGQNATTNAPGERNLAIQSYVISAKDNSGAGRIEVSVEEGLPSWMQIQTDGATG
TLILRGERPEGDNSTYQVKVKLKRVDGEEVEVIITVEPVVEEGQGSDANAPKVPDGPGLA
PAPGATGGANNAIQPGDQASLDWIEQLLASLDNQDTDGAHVPTDAPDLAAKSGFADQMAE
IRIARDVWQARLMQG
NT seq
8148 nt
NT seq
+upstream
nt +downstream
nt
atgctaatgtatatgttccgcgttgtgtgtgttggggttgccatggctcatcgttttttc
tcctcccggctgatttcggaacttgaaccgcgcgttatgtttgacggcgccggggcgatt
gtcgcagacactgttttgggcgatgcggatagtaccgctgttgaccagcatgttcaggac
acacaggatgccacagccgcaagcgatgccttcaatagccagggcgcgcaactggcaacg
ggcagcccggttgatggtgccagtgctgacagcgtagctgacgcgggaacgactgatggc
agcgccacacttgattcagccagcatttccgacattgcaataaccgaccttggcggtgtt
gacgccagtgtcgcgctgaccccgcgcgaagtggtgatctatgatccctcgattgatggt
cttgatgatctgctgtcgcagttggatggcaacaccctggttttcgcgcttgatagcggc
gaagatgctctaagccagatcgcgcggatcatgtccgaagtcggctcggtcagcgggttg
catatcgtttcccacggtgatgatggcgcgattgaactgggtggcaaaaccatcaccact
gaaacgctgctgggctcaagcgatgttctggcgtcctggcaaaccagcatgacggcggat
gccgatattctgctttacggttgcgaagtgggggatggtgttgccggtcaggcatttttg
catacattttcggcacttaccggtgcggatgttgccgcatccgatgacgttaccggcctg
gctgccttgggcggggactgggacctggaagtacatgtcggtgccattgaaaccagcgtg
ctggcaccgctaagcggttatcagggcgttctgaccaccgcgatgagtgcggccagcacc
aattttgccgaagttctgaaaggcgggtcctttgacccgggccaggatacccaggcaacg
gcggctgttgaccttgtaggcgatgccagcaatgccatgctttacatcaagtatgatgac
aatggcacgacgggcactaccagtgatgatgaaatctattttcgtcttcgcacggaccat
tctgccgataaaagccagggtttcagcggttatgcctggatgggcatggatgttgatggc
gacggcgaccttgatgccttcctgatggcatttggcacctcgcagggtttttccattaac
gtttacagtgccggcaccggtgccaataactcgcccagcaccaccagcctcgatagccag
aaccctgttgccattgtcaccaaagaagccgtttctgtggatgctacgggttcggttctg
aactattccagcagtgcttcaagctattttggccgggttgccgatattgatagtggtgca
aatggcaatatcgataacgatggtgacaccgactatttcctgaccttcaaggtcaatgcg
gataatttcttctccaaggtcaacacactgaaggtgaccgggggtggcggcgcgcttatt
tcgtcgattaacggcaataccggcatcaataaagataccaatctgcgttttgttgttgcc
accgcgcagcaggccaactcgcttaatggtgatatgggcggtatcaatgatggtacggcc
gataaaaccgcgacctattcgtcgcttggcatgttcgtaacagggtcgcttggcaaccct
gaaaccctgagcaccggcaccggcaccgcgccaaccattacggtgggtgatctcagcttt
accgaaggcaacagcgcaacccagatcgataccggtgccagtgcatcagacagcaatggc
gataccgattgggacaccaattccaaaatggaagtccagctgacatcgaatgccgaaagc
accgatcagttggcgattgccaccaacggtaatttcaccatttccggcggcaatctgtcg
cataacggaacggtgattggcacggtttccgaaaccagcggaaccgccaatgacggtatt
gtcaccggttccgacaagctgacgatcaatttcaacagcaatgcgaccaacgccattgtt
caggaacttgcgcgttcgattacattctttaacagctcggaaaatccgctggccctggca
cgtattgccaccttcaccctgacggacaagggcggtctgaccggttcggacacctccacc
atttccgtgaccccggtaaatgatgcgccaacggcatccaacaacaccgtcacgacggcc
gaggacacaccaaaggtctttgccgcggctgatttcaatttctccgatgtcgatggcaac
agccttgcatcggttcagatcaccacattggaaaccaagggcagcctgcaatataattcg
ggcggtacctgggttgatgtgacgctgaaccaggtcatcaccaaggccgatatcgatgcc
ggaaagctgcgtttttcgcctttggccaatgatagcggcacaagctataccagctttgac
ttcaaggtttccgacggcacggtctattcagtctccgcctatacgatgacggtggatgtt
acgccggtaaatgatgcgccaacagcggcgaacaacaccgttacgacaaacgaagatacc
gcaaaggtctttgcagctagcgaattcaactttgccgatgtggatggcgacagcctggca
aaaatccagatcaccacactcgaaaccaacggcaccctgcaatatcaatcgggcggtaac
tgggttgatgtgacgctcaatcaggaaatcagcaaggctgatattgatctgggtaacctg
cgtttcatgccagcggcgaatgcgaatggcagcagttatgacagcttcggtttcaaggtg
tcggacggttctgtttattcgtcttcggcctacaccatgaccgtggatgtaacggcggtg
aatgatgcgccgacggcggccaacaacaccgttacgacaaacgaagataccgcaaaggtc
tttacagcgagcgaattcaactttgccgatgtggatggtgacagcctggcaaaaatccag
atcaccacactcgaaaccaacggcaccctgcaatatcaatcgggcggtaactggatcgat
gtgacgctcaatcaggaaatcagcaaggctgatatcgataacggcaacctgcgtttcatg
ccagcagcgaatgccaatggcagcagctatgacagctttggtttcaaggtgtcggacggt
tctgtttattcgtcttctgcgtacaccatgacggtggatgttacgccggtaaatgatgtg
ccgacggcggcgaacaacaccgttaccactaacgaagataccgcaaaggtctttaccgcc
agcgaattcaactttgccgatgtggatggtgacagtctggcaaaaatccagatcaccaca
ctcgaaaccaacggcaccctgcaatatttcaatggcacgtcctgggttgatgtgacgctc
aatcaggaaatcagcaaggctgatatcgataacggcaacctgcgtttcatgccggcagcg
aatgccaatggcacaggctatgacagctttgaattcaaagtgtccgatggcacggattat
tcggcttccgcttacaccatgacggtggatgttacgccggtaaatgatgtgccagcaggg
gcagacaacaccgtaataaccgcgatcaatacgccgaaggtttttgcatcgtccgacatc
acctttaatgatgtggaatcaaccgattacagcaaaatccagatcaccgcgctggaaaca
tccggaacgctgcaatatttcatcggcacaagctgggtcgatgtgacgctgaaccaggaa
ttcaccaaggccgatattgataatggcaatctgcggtttgtaccggtcaacaatgccagt
ggtcagggctatgacagctttgaattcaaggtatctgacggaaccgcatattccagtgat
gcctataccatgaccatcgatgttaccggcagcatcgcgccgaccatttcggttgctgat
ctcagctttaccgaaggcgatggtgcaaccgcgattgatggcagtgcaaccgcatcggac
agcgatggcgatagtgattgggatgccagcgccaagctcgaagtccagttaacggcaaat
gcgcaaagcagcgacagcctgtcgattgcgaccagtggcaatttctccatatctggcagc
aacctgctttataacagcacgattattggcaccatcgaagaaaccagcggcaccgccaat
gacggtgtcgtaagcgctggcgacaagctgacgatcaatttcaccagcaacgccaccaat
gccatcgtgcaggaacttacccgttccattacctttaataacagctcggaaaatcctgat
acatcggcacgcaccgcaactttcaccctgaccgataaaaccggttccagcggcagcgat
acggccaccattacggttgccgcggtaaatgacgcgccaacggcggcgaacaacaccgtt
acgacaaacgaagataccgccaaggtcttcactgccagcgaattcaactttgccgatgtg
gatggcgacagtctggcaaaaatccagatcaccacactcgaaaccaaaggtagcctgcaa
tatttcaatggtacgtcatgggtcgatgtgacgctcaatcaggaaatcagcaaggccgat
attgataacggtaacctgcgtttcaccccggcagcgaatgccaatggcagcagttatgac
agcttcggtttcaaggtgtcggacggaaacgcttattcgtcatctgcctacaccatgacc
gtggatgttacggcggtgaatgacgcgccgacggcggcgaacaacaccgtcaccaccaac
gaagataccgcaaaggtctttgccgccagcgaattcaacttcactgatgttgacaatgac
ccgctggcaaaggttcagatcaccacactcgaaaccaagggcagcctgcaatatttcaat
ggcacgtcctgggtggatgtgacgcttaatcaggaaatcagcaaggctgatattgataac
ggcaatctgcgtttcaccccggcagccaatgccaatggcagcagctatgacagctttggc
ttcaaggtgtcggacggttctgtttactcgtcttctgcctacaccatgaccgtggatgtt
acggcggtgaacgacgccccgacggcggcgaacaacacggttaccacaaacgaagatacc
gcgaaggtctttgcagccagcgaattcaactttgccgatgttgacaatgacccgctggca
aaggttcagatcacgacgctcgaaaccaagggcagcctgcaatatttcaatggcacatcc
tgggtcgatgtgacgctcaatcaggaaatcagcaaggccgatattgataacggcaatctg
cgcttcaccccggcagcgaacgccaatggcagcagctatgacagctttgggttcaaggtg
tcggacggaaacgcttattcgtcgtctgcctacaccatgaccgtggatgtcacggcggtg
aatgatgccccgacggcggcgaataatactgtcactaccaacgaagacactgccaaggtc
ttcacggcaggtgagttcaattttgccgacgttgataatgacccgctggcaaaggttcag
atcaccacgcttgaaaccaagggcagcctgcaatatttcaatggcacgtcctgggtggat
gtgacgcttaatcaggaaatcagcaaggccgatattgataacggcaatctgcgcttcacc
ccggcagccaatgccaatggcagcagctatgacagctttggcttcaaggtgtcggacggt
tctgtttactcgtcttctgcctacaccatgaccgtggatgttacggcggtgaacgacgcc
ccgacggcggcgaacaacactgtcaccacaaacgaagataccgcgaaggtctttgcagcc
agcgaattcaactttgccgatattgataatgacccgctggcaaaggttcagatcaccaca
ctcgaatccaagggcagcctgcaatatttcaatggcacgtcctgggtcgatgtgacgctg
aaccaggaaatcagcaaggctgatattgataacggcaatctgcgtttcaccccggcagcc
aacgccaatggcagcagctatgacagcttcggcttcaaggtgtcggacggaaacgcttac
tcgtcttctgcctacaccatgactgtcgatgtcacggcggtgaatgacgcaccgacggcg
gcgaataatactgtcactaccaacgaagacactgccaaggtcttcacggcaggtgagttc
aattttgccgacgttgataatgacccgctggcaaaggttcagatcaccacgcttgaaacc
aagggcagcctgcaatatttcaatggcacgtcctgggtggatgtgacgcttaatcaggaa
atcagcaaggccgatattgataacggcaatctgcgcttcaccccggcagccaatgccaat
ggcagcagctatgacagcttcggcttcaaggtgtcggacggttctgtttattcatcttct
gcctacaccatgaccgtggatgttacggcggtgaatgatgcaccgacggcggccgataag
accctgtcgacaacctatgaaaaaccggttgtgatccagacatccgatcttggatatggc
gataccgaaggcagcgccctgaccaaaatccggatcaccacgctggaagccgccggtcag
ctacaatattacaatggcacatcctgggtggatgtgacgctgaaccaggaaatcagcaag
gctgaccttgatgcgggcaatctgcgcttcagcccggcccagggtggcagtggcaatgcc
tatgccaacttcaaattccaggttcatgacggcaccgattattcggcaacgcccaatacg
attacctttaatgtcgggccgaataccgcacccgctgtcacgtcaaatggcggtggcagc
actgcaaccatttccgtgtccgaaaaccagacggcggtaacaaccgttaccgcaaccgat
gccgaaaaccagaatttgacctattccatcagcggtggcgaggatggggccaaattcagc
attaattccgcgactggcgcgctggtgttcaaagccgcaccggattatgaaaacccgacc
gatattggtgcgaataacacctatatcgttgaagtttccgtatccgacggcaatgggggc
gtaaccaaacaattgatcacggtgaatgtcaccgatgttccggaaactgtttatattccg
cccgtagcaccaaccccggcaccggtgccaaccccggcccccacaccggcacccacgccc
gcacccgcgccggtcattgcaacgccgcccgcccaaacaccgctgacccccgaacccacc
aaccagcagcagggtccggtcaacgatccaaccattatcacaaccggtaatggcccgggc
tttagcacggttgtctttaccgggcagggcaccagccagcagacggttcagaatatcgcc
atttcggttagcagcgttgtttccaccaccacaacggcaacaaccagcagcagcacgacc
cagggcgaaaatgcacagaatggccagaatggccagactgggccgaatgcacagggtgct
aacgggcaggggaaccagaccgggcaaaacgcaaccaccaatgccccgggcgagcgtaat
cttgccatccagagctatgtgatctcggccaaggataacagcggtgctggccggatcgag
gtttcggtcgaggaaggtttgccctcctggatgcagatccagaccgatggtgccaccggc
accctgattttgcgcggcgaacgccccgaaggtgacaattccacctatcaggtgaaggtc
aaactgaagcgcgtcgatggcgaggaagtcgaagtgatcatcactgtcgagcccgtggtt
gaggaaggccagggcagtgatgcaaatgccccgaaagtacccgatggtccgggccttgcc
ccggcaccaggggcaactggcggggcgaacaatgcgatacagccaggtgaccaggcatcg
cttgactggatcgaacagcttttggcgtcgcttgataaccaggacacggatggagcgcat
gttcccaccgatgccccggatctggccgcaaaaagtggctttgccgatcaaatggcggaa
attcgaattgcacgtgacgtatggcaagcgcgcctgatgcaggggtga
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integrated database retrieval system
