Thalassospira marina: CSC3H3_03365
Help
Entry
CSC3H3_03365 CDS
T05224
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
thac
Thalassospira marina
Pathway
thac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CSC3H3_03365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thac03400
]
CSC3H3_03365
Enzymes [BR:
thac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CSC3H3_03365
DNA repair and recombination proteins [BR:
thac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CSC3H3_03365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Mod_r
MG280
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
AUG51861
UniProt:
A0ABM6Q5S8
LinkDB
All DBs
Position
759093..760820
Genome browser
AA seq
575 aa
AA seq
DB search
MTQDLFDPYAPQPQQTGNLPEFSVSDLSNALKRTVEDAFSFVRVRGEISGFKRASSGHLY
LALKDDNAVLDGVCWRGAAAKLGISPEDGMEVIVTGRLTTFPGRSKYQIVIDSMEVAGEG
ALLKLLEDRKKKLAAEGLFDADRKRPIPFLPDVIGIVTSPTGAVIRDIMHRLRERFPRRV
LLWPVLVQGKGAAEQVAHAVRGFNELLPHGDIPRPDVLIVARGGGSLEDLWSFNEEIVAR
AVAQSSIPVISAVGHETDTTLIDFVSDLRAPTPTGAAEKAVPVRLDLLAQVNDDGQRLIG
AVRRLAGDKRMGLESAARALGDPRRMLEDRAQSFDNWSERLPRAMQSVLQQARARLNETA
SRLASPREQLSEKRNRLENAGLKLQTVIDRQVQQQKSRLDRAAAGLRPNDAKNDIRRNNR
QIEDLGDRLKRAMQNTIVREGEGLARYDRLLESFSYRNVLKRGFAVVRDSNGKLVDHAAL
LAMGQHYRLEMRDGSADMQLAGETPTGTGAQPLRPAAPVENTDKPAAPSPVEAAPVVPAT
KPDAAASNSSAEKPKKPRRKKDPTPQEDDRQGSLL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaagatttgttcgacccatatgccccgcaaccgcaacaaaccggcaatctgccg
gaattttcggtttccgacctgtccaacgcgctgaaacgcacggtcgaggatgccttttca
tttgtccgggtgcgtggcgaaatttccggctttaaacgtgcctccagcggccatctttat
ctggcgctaaaggatgataatgccgtgctcgatggggtttgctggcgtggggcggcggcc
aaactgggcatttcacccgaagatggcatggaggtgatcgtcaccgggcgcctgaccacc
tttcccggccggtccaaataccagatcgtgatcgacagcatggaagttgctggcgaaggc
gcgcttctgaaattgctggaagaccgcaaaaagaaactggccgccgaaggcctgtttgac
gcggaccgcaaacgccccattccgtttttgcccgatgtgattggtattgtcacttcaccc
accggggcggtgattcgcgatatcatgcatcgcctgcgcgaacgttttccgcgccgggtg
ctgttatggccggtattggtgcagggcaagggcgcggccgaacaggtggcccatgccgtg
cgcggctttaacgaattactgccccatggcgatattccgcgcccggatgtgctgattgtc
gcgcgtggtggcggatcgctggaagatttatggtcttttaacgaggaaatcgttgcccgt
gcggtggcgcaatcttccattcccgtcatatcggcggtgggccatgaaaccgataccacc
ctgatcgattttgtatctgacctgcgggcgccgacccccaccggggcggcggaaaaggcc
gtacccgtgcggctggatttgctggcacaggttaacgacgatggccagcgcctgattggt
gccgtgcgccgtttggcgggtgataaacgcatggggttggaaagtgcagcccgtgcgctg
ggcgatccgcgccggatgcttgaagatcgggcacaaagctttgataactggtcggaacgt
ttgccacgtgcgatgcaatcggttttgcagcaggcacgcgcacgactgaacgaaaccgca
tcgcgcctggcaagcccgcgtgaacagctttcggaaaaacgcaaccggctggaaaatgcc
gggctgaagctgcaaaccgtgattgaccggcaggtgcaacagcaaaaatcacggctggac
cgtgccgcagcaggcctgcgccccaacgatgccaaaaacgatatccgccgcaataaccgc
cagatcgaggatttgggtgatcggctgaaacgtgccatgcagaataccattgtgcgggaa
ggcgagggactggcgcgttatgaccggctgctggaaagtttttcctatcgcaatgtttta
aaacgcggttttgccgtggtgcgcgatagcaatggcaagctggttgatcatgccgccctg
ttggcaatgggccagcattaccgcctggaaatgcgggatggcagtgcggatatgcagctt
gccggggaaacgccgacgggtacgggggcacagcccttgcgccccgctgcaccggttgaa
aacacggacaagccagcggcaccgtcgcccgttgaggctgcgccggttgtacctgccacc
aaacccgatgccgccgcatcaaattcttcggcggaaaaacccaaaaagccgcgccgtaaa
aaagaccccaccccacaggaagatgaccgtcaagggagcctgctataa
DBGET
integrated database retrieval system
