Thalassospira marina: CSC3H3_04050
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Entry
CSC3H3_04050 CDS
T05224
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
thac
Thalassospira marina
Pathway
thac02020
Two-component system
thac02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CSC3H3_04050
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CSC3H3_04050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
thac02022
]
CSC3H3_04050
02035 Bacterial motility proteins [BR:
thac02035
]
CSC3H3_04050
Two-component system [BR:
thac02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
CSC3H3_04050
Bacterial motility proteins [BR:
thac02035
]
Flagellar system
Flagellar assembly proteins
Others
CSC3H3_04050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Response_reg
MCM
AAA_16
AAA_19
AAA_2
AAA_3
HTH_50
AAA
ATPase
AAA_22
nSTAND3
HTH_Tnp_ISL3
TadZ_N
AAA_18
DUF2274
Motif
Other DBs
NCBI-ProteinID:
AUG51982
LinkDB
All DBs
Position
complement(913096..914739)
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AA seq
547 aa
AA seq
DB search
MQVLIVGGLGGQIGAASKIAMARGASVQLAESVTTALNILRAGKRIDLVMADIALDVGAL
ITALSTERISVPVVACGVGNDINGAVNAIKAGAQEYIPLPPEAALIAAIFEAVTEESHAL
IHRDPRMTETLRLAEQVARSNASILITGESGTGKEILSRFIHRKSNRADKPFVAVNCAAI
PDNLLESELFGHEKGAFTGAQARRIGKFEEADGGTLLLDEISEMDVRLQAKLLRVIQERE
IDRLGGSKPVKVDVRILATSNRDLESYVQQGNFREDLYFRLNVVNLDIPSLRERPGDIPV
LAEFFVRKYSEANDMPIRPISPLAIDRLISHYWRGNVRELENTMHRAVLIAGPDEIGPEA
IMLTGGAPAGAQSQPAPAQQPAAPATAPANGSDPRDIARSNAAAAAYNPTYVNQAYRNSG
AASSGYGQPAPHPYDAARPAEQSAAHTPAAPADDAAHTSHHAPDGSGVPSAETADHGVIS
DNGSITAALVGRTVADVERELIIDTLKHCFGNRTHAANILGISIRTLRNKLRQYTDEGVD
IPLPGNG
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtattgatcgttggtggactgggcggccagatcggcgcagccagcaagatcgcg
atggcccggggtgcctcggtacagttggccgaaagcgtcaccacggcgttaaacatcctg
cgcgcgggcaagcggattgatctggtcatggccgatatcgcgcttgatgttggtgcgctg
attacggccctgtcgaccgaacgcatcagcgtaccggtggtggcctgtggcgtgggtaat
gacattaacggtgcggtaaatgccattaaggccggtgcgcaggaatatatccccctgccc
cccgaagccgccctgattgcggccatttttgaagccgtaaccgaagaaagccatgccctg
atccatcgcgacccgcgcatgaccgaaaccctgcgtctggccgaacaggtggcacgcagc
aatgcatccatcctgatcacgggtgaaagtggtaccggcaaggaaattttaagccggttt
atccaccgcaaatccaaccgggcggacaaaccctttgtcgcggtgaattgcgcggccatc
ccggataacctgctggaatcagaactgttcggccatgaaaaaggggcctttaccggcgcc
caggcccggcgtattggcaaatttgaagaggccgatggcggcacccttttgcttgatgaa
atcagtgaaatggatgttcgcctgcaggcaaagctgttgcgtgttattcaggaacgcgaa
attgaccggctgggcggcagcaaaccggtcaaggtcgatgtccgcattctggcgacatca
aaccgcgatctggaatcctatgtccagcagggcaatttccgcgaagacctgtatttccgt
ttgaatgtcgtcaatcttgatattccgtcgttgcgcgaacggccgggcgatattccggtg
ctggcagaatttttcgtgcgcaaatattccgaagccaacgacatgccgatccgcccgatc
agcccgctggcgattgaccggctgataagccattactggcgcggcaatgtgcgtgaactt
gaaaataccatgcatcgcgcggtgttgattgccgggccagatgaaatcgggccagaggcc
atcatgctgacgggcggcgcacctgctggcgcgcaatcacaacccgccccggcacagcag
cccgctgcccccgcaacagccccggcaaacggcagcgacccgcgcgacattgcacgcagc
aatgcggccgcagcggcctataaccccacctatgtcaaccaggcctatcgcaattccggc
gcggcaagcagcggttatggccagcctgccccccatccttacgatgcggcccgccccgcc
gaacagtccgccgcccatacaccggcagccccggcagatgatgcagcccatacatcccat
cacgcgccagatggcagcggggtgccgtctgcggaaacggctgatcacggggtgatttct
gacaatgggtcgatcacggcagcgctggttgggcgcacggtggccgatgttgaacgtgaa
ctgattatcgataccctgaaacattgttttggcaatcgcacgcacgccgccaatatattg
ggtatatcgatccgtactttgcgtaacaaactgcgccaatataccgatgaaggggttgat
attccgctgccgggcaatgggtga
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