Thalassospira marina: CSC3H3_04550
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Entry
CSC3H3_04550 CDS
T05224
Name
(GenBank) GGDEF domain-containing protein
Organism
thac
Thalassospira marina
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS
PAS_9
PAS_4
PAS_3
PAS_8
PAS_10
Motif
Other DBs
NCBI-ProteinID:
AUG52073
UniProt:
A0ABM6Q6E9
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All DBs
Position
1025825..1028935
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AA seq
1036 aa
AA seq
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MGANISTDAASTVAALIACDRVPAAVIAPDRQEMLVNAAWAGVFDVPVSDNTQWLPIGDC
VRISGIIDQARACSDRVEPQGETFVLPVAERDHSYFLGWWLPADGGNLIRVVMLTQEDRL
VSSGLMISPLPVLVLGQQGEFRHGNAAAELIALEVGLPNVAALATPNGQRPLSGPPEEGE
HLRSVHYGQRIFQWRRTFLVDNCGIALFGRDCTREESYRRALEHAVQGIVDLAPDGRMTS
VSDAVASLFGYDNAGAVKRAYLANPESFYARDDDLVDLRQHLRRGNGFSGREIEMRRHDG
SQVWVRMNATVIHGEGGILLGYSITLIDVTKNRQAEHDLRRRQERYRALVQTAGSVIMFL
DTEGRILEYNRESEWTFGYSWMEAAGRNFFDLLVVERERRAVAQRINRMIAGEIIKDEVV
SICRKDGEIRLLQWNVRAHFAENGNVAGVICIGQDVTEKTAVERALRLAEEKYRGIFENS
AEGLYQAKPLGPLLSANPAFVSIMGYRDERDLVLKEKAVRDGFYLQPGTRLQFTGRLLRD
GYVQGFEAELRRGDGKIIWIEENARLVRDDRGVPVLIEGSITDITDRKRSEARIQFLAHH
DGLTGLPNRTLFQERLAAAVARGKREHSSFVLMLFDLDNFKDINDTLGHPIGDLLLQGVG
ERMRVRLRNEDVVARLGGDEFAVLLHDPGSPEEIALVAQRLIERVSERFMLEGNEVLVST
SVGICVYPKDGRDEKDLLRNVDLALYCSKAEGRNRYHFFETRLQLEVQERKALERDLSRA
IANNEFELFYQPIIDVKDHRIVGMEALVRWFHPSRGLVSPVDFIPVAERMGIIAEVGKWV
LNNACLQTREWNNAGLGKLLISVNLSPLELARHEDLIESVGDALQKTGLDPHQLQFEVTE
GAMMDNPREAAITLGMLRNQGIRIAIDDFGTGYSSLAYLKRFPVDKLKIDRSFIIDLDQE
DGNSAIVRAVVFMARSFGMSVNVEGIETEKQLDRIRAEGVDELQGFFFSKPLPAPEMEAL
LQKQIGAGLVPGMTTH
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgggagccaatatttcaactgacgccgcttcgacagtcgcggccctgattgcctgtgac
cgagtgccagcggcagtcattgctcctgaccggcaagaaatgctggtgaatgcagcatgg
gccggcgtgtttgacgtgcccgtgagcgacaatacccagtggctgccaattggcgattgt
gttcgtatttccggtattattgaccaggcgcgcgcatgcagcgatcgggtggaaccccag
ggcgagacatttgtcctgcccgtggccgagcgcgaccatagctattttctgggctggtgg
ctgcctgctgatggcggaaatctgatccgggttgtgatgctgacccaggaagaccggctt
gtttcatcgggtttgatgatttcgcctttgccggtactggtattgggccagcagggcgaa
tttcgccatggcaatgcggcggccgaactgattgcgctagaggtgggattgcccaatgtg
gcggcactggcaacacccaatggccagcgtcccctgagcggcccgcccgaagaaggcgaa
catctgcgttccgtgcattacgggcagcgcatattccagtggcgacggacatttctggtt
gataattgcggaattgcgctgttcgggcgtgattgcacccgcgaagaaagttatcgccgg
gcattggaacatgcggtgcaggggattgtcgacctggcaccggacgggcgaatgacatcg
gtaagcgatgcggtggcatcgctgtttggctatgacaatgcaggtgcggtcaagcgcgcc
tatcttgccaatcccgaaagtttttatgcccgcgatgatgacctggttgacctgcgccag
catttgcgtcgcggcaacggctttagtggccgcgaaattgaaatgcgccggcacgatggc
agccaggtttgggtgcgcatgaatgccaccgtcattcatggcgaaggcggcattttgctg
ggttacagcattaccctgattgacgtgaccaaaaaccgccaggccgaacatgacctgcgc
cgccgtcaggaacgttaccgtgcgctggtacagacggcaggcagcgtgatcatgttcctc
gataccgaagggcgtattctggaatataaccgcgaaagcgaatggacatttggctattcg
tggatggaggctgcgggccgcaacttttttgatctgctggtggtagaacgcgaaagacgc
gcggttgcccagcgtatcaaccgcatgatcgccggtgaaatcatcaaggacgaagtggtt
tcgatttgccgcaaggatggcgaaatccggcttctgcaatggaacgtgcgcgcccatttt
gccgaaaatggcaatgtcgccggtgtaatttgcatcggtcaggatgtaaccgagaaaacc
gcggttgaacgcgccctgcgtctggccgaagaaaaatatcgcggcatttttgaaaactcg
gccgaagggctatatcaggcaaagccattggggccgttactgtcggccaacccggccttt
gtttcgatcatgggttatcgcgatgaacgcgaccttgttttgaaagaaaaggcggttcgc
gacgggttttacctgcaaccgggcacgcgcctgcaatttaccgggcgcctgttgcgcgat
ggatatgtccagggttttgaagccgaactgcgccggggtgatggcaagatcatctggatc
gaggaaaatgcccgcctggtgcgcgatgatcgtggtgtgccggttctgatcgaagggtcg
atcactgatattaccgatcgtaaacgttcggaagcacgcatccagtttctggcccatcat
gacgggttaacgggcctgccaaaccgcacgctgtttcaggaacggctggctgccgctgtt
gcgcggggcaaacgcgaacatagcagttttgtcctgatgctgtttgaccttgataatttc
aaggacatcaacgacacgctgggccacccgattggtgatttgctgttgcagggtgtgggc
gaacggatgcgcgttcgtctgcgcaacgaggatgtagtggcacgcctgggcggcgatgaa
tttgcagttttgctacatgaccccggttcaccagaggaaatagccctggtcgcacagcgc
ctgattgagcgcgtgagcgagcgtttcatgctggaaggcaatgaagtgctggtttcgaca
tcggtggggatttgcgtttatcccaaggatggacgcgatgagaaggacctgctgcgcaat
gtcgatctggcgctttattgttccaaggccgaagggcgcaaccggtatcatttctttgaa
acgcgattgcagcttgaagtgcaggaacgcaaagccctggaacgcgacctgtcgcgtgcg
attgccaataatgaattcgaactgttttaccagccgatcattgatgtgaaggatcaccgc
attgtcgggatggaggcgctggtgcgctggttccatccgtcacgcgggctggtcagcccg
gttgattttattcccgttgccgaacgcatgggcatcattgccgaagtgggcaaatgggtg
ctgaacaatgcctgtttgcaaacccgcgaatggaataatgccgggctgggcaagcttctg
atttcggttaatctttcaccgcttgaactggcccgccatgaagacttgatcgaaagtgtc
ggcgatgccctgcaaaaaacggggctggacccgcaccagttgcagtttgaagtaaccgaa
ggggcaatgatggataacccgcgcgaagcggccatcacgctgggcatgttgcgcaatcag
ggcattcgtatcgcgattgacgatttcggcaccggttattcgtcgctggcctacctgaaa
cgcttcccggtggataaactgaagattgaccggtcattcatcatcgatctggatcaggaa
gatggtaattcggccattgtgcgcgccgtcgtctttatggcgcggtcctttggcatgtcg
gttaatgtcgagggcatcgaaaccgaaaagcagttggaccgtatccgggccgaaggtgtg
gatgaattgcagggctttttctttagcaaacctctgcctgccccggaaatggaagcatta
ttgcaaaaacagattggcgcgggcctggtgccgggcatgaccacgcattaa
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