Thalassospira marina: CSC3H3_05540
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Entry
CSC3H3_05540 CDS
T05224
Name
(GenBank) tetracycline resistance MFS efflux pump
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
thac
Thalassospira marina
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thac02000
]
CSC3H3_05540
01504 Antimicrobial resistance genes [BR:
thac01504
]
CSC3H3_05540
Transporters [BR:
thac02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
CSC3H3_05540
Antimicrobial resistance genes [BR:
thac01504
]
Gene variants
Tetracycline resistance genes
Transporters
CSC3H3_05540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
LacY_symp
ATG22
Motif
Other DBs
NCBI-ProteinID:
AUG52244
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Position
complement(1241602..1242816)
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AA seq
404 aa
AA seq
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MPNTRRPLIVIYFALCLDAVGVSLVFPILPRLLAEVTQDGNAAFYIGIMTSLYAVMQFIF
APVLGALSDHLGRRPILLLSLAGAAINYLIMAFAPHLWMLLLGRLIAGLTSANAAVASAY
ITDISAENDRARRFGLMNAMFGAGFIIGPVLGGVLGDYWVRLPFIAAAILNGYNFLLAFF
ILPETRAKTGQKIALGTLNPLSPLRWVFSMAGLLPVVLVFFLLSGMGEAYGTCWALWGAD
TFQWNGLWIGLSLGMFGICQTLVQAFLPGPATRFLGERGAVIAGICCACLALVVMAFARQ
GWIIFAIMPVFALASIGTPAFQALATRKVDAARQGQLQGVLTSAVSLATVIGPLAFSAFY
MLVQKTWPGAIWLSVVGLYVLAVPLVIFSTRKATTRQTGQTETA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacaccagacgccccctgattgtcatttattttgccctatgcctggatgctgtg
ggcgtcagccttgttttcccgatcctgccgcgcctgctggccgaggtcacacaggatggc
aatgctgccttttatatcggcatcatgacgtcgctttatgcggttatgcagttcatcttt
gcgcccgttttgggcgcactcagcgatcatttggggcgcaggccaatattgctgctgtcg
cttgccggggcggccatcaattacctgatcatggccttcgccccgcatttatggatgctg
cttttaggcaggctgattgccgggctgaccagtgcaaatgctgctgttgcatcggcctat
atcaccgatatttccgccgaaaatgaccgcgcccgacggtttggcctgatgaatgcgatg
tttggcgcgggttttatcatcggcccggttctgggcggtgtgttgggcgattactgggta
cgcctgccctttatcgcggcagccattctgaacgggtataacttcctgctggcctttttc
atcctgcctgaaacacgtgccaaaaccgggcagaaaatcgcccttggcacccttaatccg
ctttctcccttacgctgggtgttttccatggccgggctgctgccagttgttctggtgttt
ttcctgctaagcggcatgggcgaggcctatggcacctgctgggcgttatggggagccgat
acatttcagtggaacgggctttggattggcctgtcactggggatgtttggcatttgccag
acactggtccaggcctttttgcctggcccagccacccgttttctgggcgaacgcggtgcc
gttattgccggtatctgctgtgcctgcctggcccttgtcgttatggcctttgcccggcag
ggatggatcatttttgccatcatgccggtttttgctttggccagcatcggcaccccggcc
tttcaggcccttgccacccgcaaggtcgatgccgcccgccaggggcaattgcaaggcgta
ctgacatcggctgtcagcctggcaaccgttatcggaccactggccttttccgcattttat
atgctggtgcaaaaaacctggcccggtgccatctggcttagtgtggtcgggctttatgtc
cttgccgttccgctggttattttcagcacccgtaaggccaccacccggcaaacgggccaa
accgaaacggcatga
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