Thalassospira marina: CSC3H3_12885
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Entry
CSC3H3_12885 CDS
T05224
Name
(GenBank) ABC transporter
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
thac
Thalassospira marina
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
thac02000
]
CSC3H3_12885
Transporters [BR:
thac02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CSC3H3_12885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA
AAA_22
AAA_21
ABC_ATPase
AAA_30
DEAD
ECH_2
AAA_5
Zeta_toxin
AAA_25
AAA_29
RsgA_GTPase
TsaE
DUF4129
Motif
Other DBs
NCBI-ProteinID:
AUG53505
LinkDB
All DBs
Position
complement(2831843..2833639)
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AA seq
598 aa
AA seq
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MASSPRNSSRLEDRDRSRDLSSLRAILPFIKPYKLQIAGAALALVVASGTVLALGNGLRF
LVDKGFADGDGGLLDQALFVLFGFTILMAFASYSRFYLVSWIGERVVADVRRAIYAHIIR
LDPGFFEVTRTGEVLSRLTTDTSLLQVVIGSSVSIALRNVLMFVGGLAMLAITSPKLTAL
VLLVVPLVVVPIIFYGRKVRRLSRESQDRIADVSAFSEESINALRTVQAYTHEEIETNRF
TGHVEGAFKTSVARISARALLTAVVIVMVFGAVGVILWIGGHDVLNGTISAGELSAFVFY
AVVVAGSVGAISEVIGDLQRAAGAAERLVALLETRPAIAAPVNAIVMPSAHQGNVSFENV
TFHYPARPDRSALTGFSLDVKAGETVALVGPSGAGKTTVFQLLLRFYDPAAGTISVDGVD
IRKADPVAVRERLGLVAQDPVIFAANAWENIRYGRPDASDADVRAAADAAHASEFLDRLP
DGFDTFLGEKGVRLSGGQRQRIAIARAILRNPSILLLDEATSALDAESEQVVQKALETIM
KSRTTLVIAHRLSTVLHADRIAVVDDGQLVAIGSHHELLETSPLYARLAKLQFERDAA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
gtggcgtcctctccgcgaaactcatcccgcctcgaagatcgtgatcgaagccgggatctc
tcctctttgcgggctattctgcccttcatcaaaccctataaattgcagatagcgggcgca
gcacttgcgctcgtcgtggcgtcgggcaccgtgcttgcgctgggtaacggtttgcgcttc
cttgtcgacaagggctttgccgacggcgatggtggcctgcttgaccaggcgctttttgtg
ctgtttggctttaccattcttatggcctttgccagctattcccgattctaccttgtctcc
tggattggcgagcgcgtggttgccgatgtaaggcgtgcaatctacgcccatatcatccgc
cttgatcccggcttttttgaagtcacccgtaccggcgaggtgttgtcacgcctgacgacc
gacacctctctgttgcaggtggttattggttccagtgtttcgattgcactgcgcaatgtg
ctgatgtttgtgggcggtctggccatgctggcgattaccagccccaaactgacagccctt
gtcctgctggtggtgccgcttgtggtggtgccgatcattttttacgggcgcaaagtacgc
cggctttcgcgcgaatcccaggatcgcatcgccgatgtcagcgccttttccgaagaatcg
atcaacgccctgcgcacggttcaggcctatacccacgaagaaatcgaaaccaaccgtttc
actggccatgtcgaaggtgccttcaaaacctcggttgcgcgtatttcggcccgcgccctg
ctgacggctgttgtcattgtcatggtgtttggtgcggtcggggttatcctctggatcggc
gggcatgatgttttaaatggcaccatctcggcgggcgagctttcggctttcgttttttat
gctgtcgtggtcgcgggttctgttggcgcaatcagcgaagtgattggcgatttgcagcgc
gcagccggtgcggccgaacgccttgtcgccctgcttgaaacccgtcctgccattgctgcc
ccggtcaatgccattgtcatgccgtcggcccatcagggcaatgtcagctttgaaaatgtt
accttccattatcctgcccgtccggaccgttctgcccttaccggcttctcgctggatgta
aaggcgggcgaaacggtggcgctggtggggccatcaggggcgggtaaaacaacagtcttt
cagttgttgctgcgcttttatgatccggccgctggcaccatttcggtggatggcgtggat
attcgcaaggcagacccggttgccgttcgcgaacgtttggggcttgtcgcccaggatccg
gtgattttcgctgccaatgcctgggaaaatattcgttatggccgcccggatgccagcgat
gccgatgtccgtgctgctgccgatgcagcccacgccagcgagttcctggatcgtctgccc
gatggctttgataccttcctgggggaaaagggcgtgcgcctttcaggtggtcagcgtcag
cgcattgccattgcacgcgccattttgcgcaatccgtccattctgctgctcgatgaagca
acaagtgcactcgatgccgaaagcgaacaggtggtgcaaaaggcgcttgaaaccatcatg
aagtcgcgcactacgttggtgatcgctcaccgtctttcaacggttctgcatgcggatcgt
attgccgtggttgatgacgggcaactggtggctattggctcgcatcacgaactgcttgaa
accagcccgctttacgcccggctggccaagctgcagtttgaacgtgatgccgcatga
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