Thalassospira marina: CSC3H3_13085
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Entry
CSC3H3_13085 CDS
T05224
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
thac
Thalassospira marina
Pathway
thac00061
Fatty acid biosynthesis
thac00071
Fatty acid degradation
thac01100
Metabolic pathways
thac01212
Fatty acid metabolism
thac02024
Quorum sensing
thac04146
Peroxisome
Module
thac_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CSC3H3_13085
00071 Fatty acid degradation
CSC3H3_13085
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CSC3H3_13085
09145 Cellular community - prokaryotes
02024 Quorum sensing
CSC3H3_13085
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
thac01004
]
CSC3H3_13085
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thac04147
]
CSC3H3_13085
Enzymes [BR:
thac01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CSC3H3_13085
Lipid biosynthesis proteins [BR:
thac01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CSC3H3_13085
Exosome [BR:
thac04147
]
Exosomal proteins
Exosomal proteins of breast milk
CSC3H3_13085
Exosomal proteins of breast cancer cells
CSC3H3_13085
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AUG53543
UniProt:
A0ABN5FG33
LinkDB
All DBs
Position
2871443..2873260
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AA seq
605 aa
AA seq
DB search
MTNLQDYAQWQNLPSMFFDLAAKNGDKPLWWTKSPETDEFVPTTWREAARQVRALARSLY
KFGIRPGDRVILLSENRTEWGIADLAIMCVGALTAPAYSTNTERDHLHIIEDSGASLAII
STKKLAQPFLHGALDSGRCRHAITIEDWGQSFVGGITISKWDDVIEQGDALDDDVDAWVA
NIKRNDTACLIYTSGTGGAPKGVMLSHGAIISNCSGAFDIIDTLGIDDEVFLSFLPLSHS
YEHTAGLYFAMSINAQIYYAESLDKLAANMAEVRPTIMTAVPRLYEMLYQRLSRTLEKEG
GFKLKLFNMTLRLGRKKYEGERLNPIEWVQNLVCELLLRRKLRQRFGGRLKAMVSGGGPL
NYELGVLFVSCGLRILQGYGQTEFSPVVSCNRAENNKLRTVGPPMLGVECKIADDGEILL
RGESIMKGYWNLPETTAQTIIDGWLHTGDIGQFDEEGSLMITDRKKDIIVNSGGDNISPQ
RIEGLLTLETEIAQAMVYGDDQPYLVAILWPEEDVMRDFARANGVENKIETLSENEEFRK
MIRLAVDRVNTRLSTIEKVRSFAFADSAFSIENEMLTPSMKIRRHKIRAAYDQRLKALYQ
RKRQN
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatttgcaggattatgcccagtggcagaacttgccgtcgatgtttttcgatttg
gccgcgaaaaatggcgacaagcccctttggtggaccaaatcccccgagactgacgaattt
gtccccaccacctggcgcgaagccgcgcgacaggtgcgtgcccttgcccgatcgctttac
aaattcggcataaggccgggcgaccgggttattttgctttcggaaaaccgcacggaatgg
ggcattgccgatctggcgatcatgtgtgtgggcgcgctcaccgcaccggcctattccacc
aataccgaacgcgaccatctgcatatcatcgaggattcaggcgccagcctggcaatcatt
tcgaccaaaaagctggcacagccctttttgcatggcgcgctggattccgggcgctgccgc
catgccatcacgatcgaggattggggccaaagctttgtcggcggcatcaccatttctaag
tgggacgacgtaatcgaacagggcgacgccctggatgacgatgttgatgcttgggttgcc
aatatcaaacgcaacgacaccgcctgcctgatttacacatcaggcaccggtggcgccccc
aagggcgtgatgctgagccacggggcaatcatcagcaactgttcgggcgcgtttgacatc
atcgacaccctcggcattgacgacgaagttttcctgtccttcctgccactgtcccattca
tacgagcatacggccgggctttatttcgccatgagcatcaatgcccagatctattatgcc
gaaagcctggacaagcttgccgccaatatggccgaggtccgcccgaccatcatgacggcg
gtgccccggctttatgaaatgctataccagcgcttaagccgcacccttgaaaaggaaggc
ggtttcaagctcaaactgtttaatatgaccctgcgcctgggccgcaaaaaatacgaaggc
gaacgcctgaacccgattgaatgggtccagaaccttgtgtgcgaattgctgctgcgccgc
aagctgcgccagcggtttggtggtcgcctcaaggccatggtttcgggtggtgggccgctg
aattatgaactgggtgtgctgtttgtttcctgcgggttacgcattttgcagggctatggc
caaaccgaattcagcccggtggtttcgtgcaaccgtgccgaaaacaacaaacttcgcacc
gtcggcccgcccatgctgggtgtggaatgcaaaattgccgatgatggcgaaattcttctg
cgcggcgaaagcatcatgaaaggctattggaacctgcccgaaaccaccgcgcaaaccatc
atcgatggctggcttcataccggcgatatcggccagttcgatgaagaaggcagcctgatg
atcacggaccggaagaaggacattatcgtcaattccggcggcgataacatatcaccccag
aggatcgaaggcctgctgacgctggaaaccgaaatcgcccaggcgatggtttatggcgat
gaccagccttatctggttgccattctgtggcccgaagaagacgtgatgcgcgattttgcc
cgggccaatggcgtggaaaacaaaatcgaaaccctgtcggaaaacgaagaattccgcaaa
atgatccgtctggccgtggaccgggtgaatacccgcctttccaccatcgaaaaggtccgc
agctttgcctttgccgatagcgcctttagcatcgaaaacgaaatgctgacgccatcaatg
aagattcgccgtcacaagatccgtgcagcctatgatcagcgcctaaaagccctttatcag
cgcaaacggcaaaattaa
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