Thalassospira marina: CSC3H3_14735
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Entry
CSC3H3_14735 CDS
T05224
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
thac
Thalassospira marina
Pathway
thac03420
Nucleotide excision repair
thac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSC3H3_14735
03430 Mismatch repair
CSC3H3_14735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thac03400
]
CSC3H3_14735
Enzymes [BR:
thac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSC3H3_14735
DNA repair and recombination proteins [BR:
thac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSC3H3_14735
MMR (mismatch excision repair)
Other MMR factors
CSC3H3_14735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
vATP-synt_AC39
AAA_22
DUF3553
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AUG55138
LinkDB
All DBs
Position
complement(3229391..3231763)
Genome browser
AA seq
790 aa
AA seq
DB search
MTDDPFEIDEYSSAPDMRLEDAPTPGYLTTLNTEQRDAVATLDGPLLVLAGAGTGKTRVL
TTRLAHLLETKGGAPEYLHPQQILTVTFTNRAAREMQERVAATLGRPVKGWWLGTFHSLA
ARLLRRHAELVGLKSNFTILDTDDQIRLLKQIMDAEQIDSKKWPAKQLMGIIQRWKDKGL
TPDRATEGMEFANGRAQQLYRIYQERLTVLNAADFGDLLLHCLTIFQKHPEVLRQYQQTF
RYILVDEYQDTNVAQYLWLRAMAMVHRNICCVGDDDQAIYSWRGAEVGNILRFESDFPGA
HVVRLEQNYRSTPHILAAASQLIAHNSGRLGKELWTEIDAGEKVQVKGVWDGESEARLVG
EDIEALQSRGIGASQIAILVRAGFQTREFEERMITLGIPYRVVGGARFYERQEIRDALAY
IRLIAQPDDSLAFERIVNVPKRGVGKVALQTLHQYSRDQSVSLPMATRELIDTEELKPKL
RKDLSIFLADFDRWRALLAEKSHVEVLEIVLDESGYTDMWRASKEIDAPGRLENLKELVS
AIGEFENLTTFLEHVSLVMENDQSDEREKVTIMTLHAAKGLEFDYVFLPGWEEGVFPHQR
AMDESGVKGLEEERRLAYVGITRARKRATVTYAANRRIYNQWQSALPSRFVDELPGEHID
RISDTGLSQGKGNVSPGAWGADDWMKPPSWANDGNASSGGYRSQNRDFSDRKFASAGWQD
RVRKNVIDVAPDGEAVFTSRKGSSKYQVGDKVRHRKFGPGTVRSVDGNKLEIHFDEVGTK
KVVDSFILPG
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgactgatgatccctttgaaatcgacgaatacagctcagccccggacatgcgtcttgaa
gacgcgccaacaccgggatacctgaccacgcttaataccgaacagcgcgacgcggtcgcg
acgctggatgggccgttattggtgctggccggggcaggaacgggaaaaacgcgggttttg
accacgcgtctggcgcatcttttggaaacaaaaggcggggcgccggaatatctgcacccc
cagcaaatattgaccgtaacctttaccaaccgtgctgcgcgtgaaatgcaggaacgtgtg
gcagccacccttggtcgcccggttaaaggctggtggctggggacgttccactcgcttgcg
gcacgtttgttgcgccgccatgccgaactggtgggtttgaaatcgaatttcaccatcctt
gatacggacgatcagatccgcctgctcaagcagatcatggatgccgaacagatcgattct
aaaaaatggccggccaagcaactgatggggatcattcagcgctggaaagacaaaggcctg
accccggaccgcgccaccgagggcatggaatttgccaatggccgcgcccagcagctttat
cgcatttaccaggaacgcctgacggtgctgaatgctgctgactttggcgatttgctgctg
cactgcctgacgattttccaaaagcatcccgaagtactgcgccagtatcagcaaaccttc
cgctatattctggtcgatgaatatcaggataccaacgtcgcccagtatttgtggttgcgc
gcgatggcgatggttcatcgcaatatttgctgcgttggcgatgatgaccaggcgatctat
agctggcgtggggcggaagtgggcaacatcctgcgttttgaaagtgattttcccggcgcc
catgttgtccggctggagcagaattatcgctctaccccgcatattctggccgcggcatcg
cagttgattgcacataattccggccgtttgggcaaggaattatggactgaaattgacgct
ggcgaaaaagtgcaggtcaaaggcgtgtgggatggtgaatccgaagcgcggcttgttggc
gaagatatcgaagccctgcaaagccggggcatcggtgcatcgcaaatcgccattctggtg
cgcgcgggtttccagacccgtgaatttgaagaacgcatgatcacgctgggtattccctat
cgcgtggtggggggcgcacggttttacgagcgtcaggaaattcgcgatgcgctggcctat
atccgcctgatcgcgcaacccgatgacagcctggcatttgaacgtatcgtcaatgtgccc
aagcgtggggtgggcaaggttgccctgcaaaccctgcatcaatattcgcgtgatcaatcg
gtttcgctgcccatggcaacccgcgaactgatcgataccgaagaactgaaaccaaagctg
cgcaaggatttgtcgatattcctggccgattttgaccgctggcgcgcccttctggcggaa
aaaagccatgtcgaggttctggaaatcgtccttgatgaaagcggctatacagatatgtgg
cgggcttccaaggaaattgatgcaccgggccgtctggaaaacctgaaggaacttgtttcc
gcgattggcgaatttgaaaacctgacgacgtttttggaacatgtttcgctggtgatggaa
aatgatcagtccgacgagcgtgaaaaggtcacgatcatgaccctgcacgccgccaagggg
ctggaatttgactatgtctttttacccggctgggaagaaggggtatttccccaccagcgc
gccatggatgaaagcggcgttaaggggctggaggaagaacgtcggctggcctatgtcggc
attacccgggcgcgcaaacgtgccactgttacctatgccgccaatcgccgcatttataac
cagtggcaaagtgccctgccgtcgcgttttgtcgatgaattgcccggcgaacatattgat
cgcatcagcgataccggcctgtcacagggcaaaggcaatgtttcgcccggtgcctggggg
gcggatgactggatgaaaccgccaagctgggccaatgatggcaatgccagcagcggcggg
tatcgttcgcaaaaccgcgatttttccgaccgcaaatttgccagtgccggctggcaggat
cgggtgcgtaaaaacgtgatcgacgttgccccggacggcgaagcagttttcacatcgcgc
aagggatcgtcgaaatatcaggtgggggacaaggtccgtcatcgcaaattcggcccgggt
accgtgcggtcggtggatggaaacaagctggaaatccatttcgacgaggtcggcaccaaa
aaggtggtcgacagttttattctgccgggttaa
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