Thalassospira marina: CSC3H3_15430
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Entry
CSC3H3_15430 CDS
T05224
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
thac
Thalassospira marina
Pathway
thac03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSC3H3_15430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
thac03400
]
CSC3H3_15430
DNA repair and recombination proteins [BR:
thac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSC3H3_15430
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CSC3H3_15430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
P-loop_SecA
AAA_22
UB2H
Ribosomal_L12
Motif
Other DBs
NCBI-ProteinID:
AUG53956
UniProt:
A0A2N3KX79
LinkDB
All DBs
Position
complement(3379602..3381749)
Genome browser
AA seq
715 aa
AA seq
DB search
MNALPEFLTKRRPPVEGSRAFKLVTEYEPSGDQPQAISELYDGIGQGERDQVLLGVTGSG
KTFTIANIIAKTQRPALVLAPNKTLAAQLYSEMKSFFPENAVEYFVSYYDYYQPEAYVPR
TDTYIEKDSSINEQIDRMRHAATRAILERNDCIIVASVSCIYGIGAVETYLEMTQRISVG
DEVDRNDIMKRLVELQYTRNDAAFTRGTFRVRGDVLEIFPAHSEDRGWRISMFGDEIEEL
TEFDPLTGHKYASMDSVTVYANSHHVTPRPTLVQAMHGIKQELKDRLAQFQNEGKLLAAE
RIEQRTTFDLEMMETVGHCKGIENYSRWLSGRNPGEPPPTLFEYLPENALLFVDESHVAV
PQIGGMFKGDYNRKFTLAEHGFRLPSCVDNRPLKFEEWDAMRPQSVFVSATPGPWEINQT
GGVFAEQVIRPTGLIDPVCIIRPVETQVDDLLAEAKDCAQKSQRVLVTTLTKRMAEDLTE
YLHENGVRVRYLHSDIDTLERIEIIRDLRLGVFDVLVGINLLREGLDIPECALVAILDAD
KEGFLRSKTSLVQTIGRAARNLEGRVILYADKMTDSLDYAIGETNRRREKQIAYNEEHGI
TPASIRSRIHDVIESVAEQDYVTVDTGVSGDVMIGHNLRAHIDELEKRMRAAAADLEFEE
AARLRDEVKRLENQELGLAEAGPMARDISLKDGAAGPGSKSANKPKYKGRRRKGP
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcactcccggaatttttgaccaaacgccgcccgccggtcgaaggatcgcgcgcg
tttaaactggtgacggaatatgaaccgtcgggcgaccagccacaggcaatttccgagctt
tatgacggcatcggacagggcgagcgcgaccaggttctgctgggtgtgaccggttcgggc
aagacattcaccattgccaatatcattgccaaaacccagcgtccggcccttgtgctggcc
ccgaacaaaacgctggccgcacagctttattccgagatgaaaagtttcttcccggaaaat
gcggtggaatatttcgtttcctattacgactattaccagcccgaagcctatgtgccgcgc
accgatacctatattgaaaaagacagttcgattaacgaacagatcgaccggatgcgccac
gccgccacccgcgccattctggagcgtaacgactgtatcatcgtggcatccgtttcctgc
atttacggtattggtgcggttgaaacctatttggaaatgacgcagcgcatttcggtaggg
gacgaagttgaccgcaacgacatcatgaagcgcctggtcgaattgcaatatacccgcaat
gacgcggcctttacgcgcggcacattccgggtgcgaggcgacgttctggaaattttcccg
gcccactcggaagatcgcggctggcggatttcgatgtttggcgacgagatcgaggaactg
accgaatttgaccccctgacggggcataaatatgccagcatggattccgtcacggtttat
gcaaattcgcaccatgtgacgccgcgcccgaccctggtgcaggcgatgcatggcattaag
caggaattgaaggaccggctggcgcaatttcagaatgaaggcaaattgctggcagccgaa
cggattgagcagcgcaccacgtttgatctggaaatgatggaaacggtgggccactgcaag
gggattgaaaactattcccgctggctttcgggccgtaaccccggcgaaccgccacccacc
ctgtttgaatatctgcccgaaaacgcgctgttatttgtcgatgaaagccacgttgccgtg
ccgcagatcggcggcatgttcaagggcgactataatcgcaaatttacattggccgaacat
ggcttccgcctgccaagctgcgtggataaccggccgctgaaatttgaagaatgggatgcc
atgcgcccgcaaagcgtgtttgtttcggcaacaccggggccatgggaaattaaccagacg
ggcggcgtttttgccgaacaggttattcgccccaccggcctgattgacccggtttgcatc
attcgcccggttgaaacccaggtggatgatctgctggccgaagccaaggattgcgcccag
aaaagccagcgcgtgctggtaaccaccctgaccaagcgcatggccgaggatttgaccgaa
tatctgcacgaaaatggcgtgcgggtgcgttacctgcattccgatattgatacgctggag
cgtatcgagatcatccgtgatttgcgactgggcgtgtttgatgtcctggttggcatcaac
ctgttgcgtgaggggctggatatccccgaatgtgcgctggtggcaattttggatgcggac
aaggaaggttttttgcggtccaaaacatcgctggtacagacgattggccgtgccgcgcgt
aaccttgaaggccgggttattttatatgccgataaaatgaccgacagcctggattatgcg
attggcgaaaccaaccgccgccgcgaaaagcagattgcctataacgaggagcacggcatt
accccggcatcgatccgcagccgtatccatgatgtgatcgaaagtgtcgccgagcaggat
tatgtcaccgtcgataccggcgtttcgggcgatgtgatgatcgggcacaatttgcgggcc
catatcgatgaacttgaaaaacgcatgcgtgcggcggcagccgaccttgaatttgaagaa
gccgcccgcctgcgtgacgaggtgaaacgccttgaaaaccaggaactgggccttgcagaa
gccgggccgatggcacgcgacatttcgttaaaggatggtgcggcggggccgggttccaaa
tcggcaaacaagccgaaatataagggccgtcgtcgcaaggggccgtaa
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