Thalassospira marina: CSC3H3_17715
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Entry
CSC3H3_17715 CDS
T05224
Symbol
pspF
Name
(GenBank) phage shock protein operon transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
thac
Thalassospira marina
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
thac03000
]
CSC3H3_17715 (pspF)
Transcription factors [BR:
thac03000
]
Prokaryotic type
Other transcription factors
Others
CSC3H3_17715 (pspF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
AAA_2
Mg_chelatase
HTH_28
AAA_16
MerR_1
HTH_23
AAA_22
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
AUG54351
LinkDB
All DBs
Position
3909424..3910449
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AA seq
341 aa
AA seq
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MDTSQTILGEDPRFLAALEHVSRLAPINRPCLVIGERGSGKELIAARLHYLSTRWGGPLV
KVNCAALSETLLDTELFGHEAGAFTGAQKRHVGRFERAHGGTIILDEIATASQMVQEKLL
RVVEYGEIERVGGSEVIEVDVRVIGVTNENLKQLAAQGKFRADLLDRLAFDVIAVPPLRE
RPDDILPLAEQFALQMTKRLSRQVFAGFDNHATQQLQNHDWPGNVRELRNAVERSLYLSE
DPDAPVSHIVLDPFAGIWSETQTSVDTNCNATKDTAPPEPPQPDQGGSIDFRKATRDYEI
RLLKQALRDCHDNQTEAARVLGLNYHQLRRLLEKYDLLPAR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggatacatcacaaaccatattgggcgaagacccccgatttttggcagcgctggagcat
gtttcgcgccttgcgcccataaatcgcccctgcctggtgattggcgaacgtggatcgggc
aaggaactgatcgcggcacgtttgcattacctttccacccgctggggcggaccgctggta
aaggtcaattgcgccgcccttagcgaaaccctgcttgataccgagcttttcgggcacgag
gccggggcctttaccggcgcgcaaaaacgccatgtcggccggtttgaacgcgcgcatggc
ggcaccatcattttggatgaaatcgcaacggccagccagatggtgcaggaaaaactgctg
cgcgtggttgaatatggcgagatcgaacgggtgggcggcagcgaggttatcgaggttgat
gtacgcgtcattggcgtcaccaacgaaaatcttaaacagcttgccgcacagggaaaattc
cgcgccgaccttttggaccgtctggcctttgacgtgatcgccgtgccgccccttcgcgaa
cgcccggacgatatattgcccctggccgaacagtttgccctgcaaatgaccaaacgtttg
tcgcggcaagtttttgcaggatttgataatcacgccacacagcaattgcaaaatcacgac
tggccgggcaatgtgcgtgaattgcgcaatgcggttgaacgcagcctttatctaagcgaa
gaccccgacgcccccgtttcccatatcgtactggacccgtttgccgggatatggagcgaa
acacaaaccagcgtcgacacaaactgtaacgccaccaaagacacagcgcccccggagcca
ccgcaacctgatcaaggtggcagcatcgattttcgtaaagccacacgggattacgaaata
aggctgctgaaacaggccttgcgcgattgtcatgataaccagacggaagccgcccgggtg
cttggcctgaattatcatcagcttcgccggcttcttgaaaaatacgacctgctgccagcg
cgttag
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