Thalassospira marina: CSC3H3_18520
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Entry
CSC3H3_18520 CDS
T05224
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
thac
Thalassospira marina
Pathway
thac00061
Fatty acid biosynthesis
thac00071
Fatty acid degradation
thac01100
Metabolic pathways
thac01212
Fatty acid metabolism
thac02024
Quorum sensing
thac04146
Peroxisome
Module
thac_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
thac00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CSC3H3_18520
00071 Fatty acid degradation
CSC3H3_18520
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CSC3H3_18520
09145 Cellular community - prokaryotes
02024 Quorum sensing
CSC3H3_18520
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
thac01004
]
CSC3H3_18520
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
thac04147
]
CSC3H3_18520
Enzymes [BR:
thac01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CSC3H3_18520
Lipid biosynthesis proteins [BR:
thac01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CSC3H3_18520
Exosome [BR:
thac04147
]
Exosomal proteins
Exosomal proteins of breast milk
CSC3H3_18520
Exosomal proteins of breast cancer cells
CSC3H3_18520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AUG54483
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All DBs
Position
4091194..4092888
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AA seq
564 aa
AA seq
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MIQMSLQQTSTVAPGVDLESPIKPRLVHDIFDDAARLFAKRPCVDFLGRVYDYSEIADQI
DKVAEGFRQLGVRKGDKVGLCLPNTPYYIVCYYAVLKCGGVVVNFNPLYAKREIAYQIND
SGIRIMVTLNLKQIYPKVAACLDETSLRRIVICEMSDILPAVKSVLFSLFKRSELADVPH
DLRNIPYSRLANCPPLQKPASTTPDDLAVLQYTGGTTGRPKGAMLTHANLSANVEQLTRW
MPNARPGQEVTLCVLPFFHVFAMTVALNTSINLGAELVLQPRFELEALLKALEKKKITIF
PGVPTIYTAINNSHETMKYDLSSIRCCISGGAPLPVEVKHQFEDLSGAKLVEGYGLSEAS
PVCTCNPLHGENREGSIGIPMPGCEVDIRSLEDRNRPLPDGEKGELFVRGPQVMTGYWQN
ADETAACMKDGWLATGDVGYRDRDGYLFLVDRLKDVIMCGGYNVYPRAIEEALYLHPEIA
EVTVIGVPDSYRGQAPKAFVRLKDDANRETVTPEALRAFLEDKISRIEMPREIELRDELP
KTMVGKLSKKELIDEERLKTTGHL
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgatccaaatgagtcttcaacaaacatccaccgttgcccccggtgttgatctggaatcg
ccaataaaaccgcggctggtgcatgacatttttgatgatgccgcccgcctgtttgccaaa
cggccctgtgttgattttctgggccgggtttacgattacagcgaaatcgccgatcagatc
gacaaagtcgccgaagggttccggcaattgggcgtccgcaagggggataaggttggcctg
tgcctgcccaatacgccgtattacatcgtttgttactatgccgtattgaaatgcggcggc
gtggttgtcaatttcaacccgctttatgccaaacgcgaaatcgcctatcagatcaatgat
tccggcatccggatcatggtgacgcttaatctgaaacagatttaccccaaggtcgctgcc
tgcctggatgaaaccagcctgcgccggattgtcatttgcgaaatgagcgacatcctgcct
gccgtaaaaagcgtgctgttttcgctgttcaaacgcagcgaactggccgatgtgccccat
gatttgcgcaacatcccctattcccggctggccaactgcccgcccctgcaaaaacctgcc
agcacaacccccgatgaccttgccgtattgcaatataccggtggcaccacgggccggccc
aaaggggccatgctgacccacgccaatctgagcgccaatgtcgaacaattgacgcgctgg
atgcccaatgcccgaccgggccaggaagttaccttatgtgttttgccgtttttccacgtc
tttgcgatgacggtggcgctcaacacatctatcaatcttggggcagaactggtgttgcag
ccgcgttttgaacttgaagcgctgttaaaggcactggaaaagaagaaaatcaccatcttc
cccggtgtgccgaccatctataccgccatcaataattcgcacgaaacgatgaaatacgac
ctttcatccattcgctgctgtatttcgggcggggcccccctgcctgttgaagtcaaacac
cagtttgaagacctgtcaggcgccaagctggttgaggggtacggcctgtccgaagcaagc
ccggtttgcacctgtaatccgctgcatggcgaaaaccgcgaagggtccatcggcatcccc
atgccgggatgcgaagtcgatatccgctcgcttgaagatcgcaaccgccccctgcccgat
ggtgagaaaggcgaactttttgttcgtggcccgcaggttatgaccggctactggcaaaac
gccgatgaaacagcagcctgcatgaaagatggctggctggccactggcgatgtcggctat
cgcgaccgcgacgggtatctgttcctggtggaccgtttgaaggacgtgattatgtgtggc
ggttacaatgtgtatccccgcgccatcgaagaagccctttatctgcacccggaaattgcc
gaagtcacggtgattggcgtgccggattcctatcgcgggcaggcccccaaggcctttgtc
cgcctgaaagacgatgccaaccgcgaaactgtaacccccgaagccttgcgcgcctttctg
gaagacaagatttcacgcatcgaaatgccccgcgaaatcgaactgcgcgatgaactgccc
aaaaccatggtcggcaagctttcgaaaaaagagctgatcgatgaagaacgcctgaaaacc
accgggcacctgtaa
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